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cg1_0.2_scaffold_3085_c

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3085_c_1
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

2..700
DNA (699bp) protein (233aa)
Tax=CG_Berkel_01
cg1_0.2_scaffold_3085_c_2
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

807..1874
DNA (1068bp) protein (356aa)
bifunctional phosphoglucose/phosphomannose isomerase; K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=CG_Berkel_01
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XRV7_9BACT rbh
phosphate starvation-inducible protein PsiE
cg1_0.2_scaffold_3085_c_3
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

1901..3448
DNA (1548bp) protein (516aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Berkel_01
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN82_DESK7 rbh
cg1_0.2_scaffold_3085_c_4
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

3451..5070
DNA (1620bp) protein (540aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Berkel_01
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Roseburia sp. CAG:45 RepID=R6PRK5_9FIRM rbh
cg1_0.2_scaffold_3085_c_5
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

5108..5674
DNA (567bp) protein (189aa)
Phosphate propanoyltransferase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QGJ2_9FIRM rbh
propanediol utilization protein Tax=CG_Berkel_01
propanediol utilization protein
cg1_0.2_scaffold_3085_c_6
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

5863..6945
DNA (1083bp) protein (361aa)
ackA; acetate kinase AckA (EC:2.7.2.1) Tax=CG_Berkel_01
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] id=86439 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
ackA; Ack (EC:2.7.2.1)
cg1_0.2_scaffold_3085_c_7
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

6986..7795
DNA (810bp) protein (270aa)
MjaII restriction endonuclease n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IK94_9BACT rbh
MjaII restriction endonuclease. Tax=CG_Berkel_01
MjaII restriction endonuclease
cg1_0.2_scaffold_3085_c_8
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

7799..8581
DNA (783bp) protein (261aa)
DNA methylase N-4/N-6 domain-containing protein; K13581 modification methylase [EC:2.1.1.72] Tax=CG_Berkel_01
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N4E9_9EURY rbh
DNA-cytosine methyltransferase
cg1_0.2_scaffold_3085_c_9
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

8618..9655
DNA (1038bp) protein (346aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=CG_Berkel_01
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
cg1_0.2_scaffold_3085_c_10
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

9807..10586
DNA (780bp) protein (260aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=CG_Berkel_01
thiamine pyrophosphate domain-containing TPP-binding protein
cg1_0.2_scaffold_3085_c_11
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

10568..11395
DNA (828bp) protein (276aa)
oorC; 2-oxoacid:ferredoxin oxidoreductase subunit gamma OorC (EC:1.2.7.-) Tax=CG_Berkel_01
oorC; 2-oxoacid:ferredoxin oxidoreductase subunit gamma OorC (EC:1.2.7.-)
cg1_0.2_scaffold_3085_c_trna_1
unknown

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11573..11645
DNA (73bp)
transferRNA
cg1_0.2_scaffold_3085_c_12
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


11663..14122
DNA (2460bp) protein (820aa)
leuS; leucyl-tRNA ligase LeuS (EC:6.1.1.4) Tax=CG_Berkel_01
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Peptoniphilus lacrimalis RepID=UPI00036F0E70 rbh
cg1_0.2_scaffold_3085_c_13
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

14146..14796
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVK6_TEPAE rbh
hypothetical protein; K07040 uncharacterized protein Tax=CG_Berkel_01
hypothetical protein
cg1_0.2_scaffold_3085_c_14
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

15006..15476
DNA (471bp) protein (157aa)
putative transcription termination factor Tax=CG_Berkel_01
putative transcription termination factor id=15189589 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) rbh
putative transcription termination factor
cg1_0.2_scaffold_3085_c_15
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

15476..16168
DNA (693bp) protein (231aa)
putative ribonuclease III (EC:3.1.26.3) Tax=CG_Berkel_01
Ribonuclease 3 n=1 Tax=uncultured bacterium RepID=K2B3Y8_9BACT rbh
hypothetical protein
cg1_0.2_scaffold_3085_c_16
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(16172..16444)
DNA (273bp) protein (91aa)
Uracil-DNA glycosylase n=1 Tax=Clostridium sp. CAG:594 RepID=R6CT52_9CLOT
Uracil-DNA glycosylase Tax=CG_Berkel_01
cg1_0.2_scaffold_3085_c_17
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(16474..16845)
DNA (372bp) protein (124aa)
phage SPO1 DNA polymerase-related protein
phage SPO1 DNA polymerase-related protein Tax=CG_Berkel_01
phage SPO1 DNA polymerase-related protein id=5099021 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version rbh
cg1_0.2_scaffold_3085_c_18
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(16842..17804)
DNA (963bp) protein (321aa)
dacB1; D-alanyl-D-alanine carboxypeptidase DacB (EC:3.4.16.4) Tax=CG_Berkel_01
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
cg1_0.2_scaffold_3085_c_19
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


comp(18115..19548)
DNA (1434bp) protein (478aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Berkel_01
aspartyl-tRNA synthetase (EC:6.1.1.12)
cg1_0.2_scaffold_3085_c_20
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


comp(19550..21895)
DNA (2346bp) protein (782aa)
pheT; Phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Berkel_01
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJJ3_IGNAJ rbh
pheT; phenylalanyl-tRNA synthetase subunit beta
cg1_0.2_scaffold_3085_c_21
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


comp(21990..22457)
DNA (468bp) protein (156aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Berkel_01
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=5803667 bin=OD1_GWC2_34_28 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Displaying 22 items

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