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cg1_0.2_scaffold_200_c_53

Organism: CG1_02_FULL_Peregrinibacteria_PER_54_53_curated

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 7 / 38
Location: 50897..52360

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_PER_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 487.0
  • Bit_score: 958
  • Evalue 3.60e-276
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor id=73010 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 319.0
  • Bit_score: 472
  • Evalue 4.30e-130
  • rbh
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 388.0
  • Bit_score: 376
  • Evalue 1.50e-101

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Taxonomy

CG_PER_01 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGGCGTCCCACCCGCGGAAGTTCATCCCTCAGCCCACTGAGGAGGACCTGGCCAAATTTCCTCCTGCAGTGAAGCACCTTATTAAGAAAGGGCGCGAGCAGCGCTACGTCACGCATCAGGAAATCATGTCCGTGGTGCCCAACGCCGAAGAGAATGTCGATCTGCTCGACGAGATTTACACCCTGCTCACCGATTTGGGCATTCAGGTGATCGATGTGAAGGATGTTCTGATTTGGGAGAAGAAAGGTACGGGCAAGTCGGCGTTGCCGGTTCCCGAGCCCACCGAGGATCTCACCGAGATCGCCGCATCGGATGTGGATGAAGATGACGATGGCGATGACAGCGAATCGGATGAGAAGGTGGAAAAGCTGGAAACGGAAGATGCCATGCAGGTGGTTGCCACGGCGGGTATTGAGATCGACGACAAAGATCTCTCGGATGACGAGAAGAAGAAACGCCGCCGCGAGCGCGAAGTCGATCTGCTCGAGATTTCGAACGACTCCGTACGCATGTATCTCTCCGAGATCGGCCGCGTACCGCTGATTGATGCACGTAAAGAGATTGAGCTCGCACGCCGCATTCGCAAAGGTGACGCCAGTGCCAAGCAGCAGCTGGCCGAGGCGAACCTGCGTCTCGTCGTTTCCATTGCCAAGAAGTACATCGGACGCGGTCTGTCGTTCCTCGATCTGATTCAGGAGGGGAATATCGGACTGTTCCGCGCCGTCGAGAAATTCGATCCGGACCGTGGATTCAAGTTCAGCACGTACGCCACGTGGTGGATTCGCCAGGCGATTACCCGTGCCATTGCCGATCAGGCGCGCACTATCCGTATTCCGGTGCACATGGTCGAGACGATCAATAAGCTTACCCACACGCAGCGCCGTCTTGTGCAGGAGCTTGGCCGTGAACCCACGGTGGAGGAACTCTCGGTCGAGATGGAAATGGATATCAAGAAGGTGCGTCACATCCAGAAAATCAGTCAGGATATCATTTCACTCGAGTCGCCGGTGGGCTCTGAAGAAGACAGTAAATTGGGTGATTTCATCGAGGATGAGGATGCCGTCAATCCCTTCGATGCCACCAATCGCCAGCTGCGCAAAGAGAACGTGCATGCCATGCTCGAGTTTCTCACACCCCGCGAGCGCAAAATCATCGAAATGCGCTTCGGTTTGCGCGACGGCATCGGGCACACGCTGGAGGAAGTCGGCAAGGAATTCGGTGTCACACGTGAGCGCATTCGTCAGATTGAGGCTAAGGTGCTGCAGAAGATGCGCGATCATCCGCGTTCCATGACGATTCGCGAGGCGGGAGGCGCCCCCAGACGCGTGGGCTTTTCACCCGTACAGACTTTCCTCACCGGCAAGCTCTGTCCCGAGTGTCGCAAGGGCACGCTGGTCGATGTGATCCGCGAGGGCAAATCCTTCAAGAAGTGCGATCACTGCGCGTACGAACTCACAAGTTAA
PROTEIN sequence
Length: 488
MASHPRKFIPQPTEEDLAKFPPAVKHLIKKGREQRYVTHQEIMSVVPNAEENVDLLDEIYTLLTDLGIQVIDVKDVLIWEKKGTGKSALPVPEPTEDLTEIAASDVDEDDDGDDSESDEKVEKLETEDAMQVVATAGIEIDDKDLSDDEKKKRRREREVDLLEISNDSVRMYLSEIGRVPLIDARKEIELARRIRKGDASAKQQLAEANLRLVVSIAKKYIGRGLSFLDLIQEGNIGLFRAVEKFDPDRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLTHTQRRLVQELGREPTVEELSVEMEMDIKKVRHIQKISQDIISLESPVGSEEDSKLGDFIEDEDAVNPFDATNRQLRKENVHAMLEFLTPRERKIIEMRFGLRDGIGHTLEEVGKEFGVTRERIRQIEAKVLQKMRDHPRSMTIREAGGAPRRVGFSPVQTFLTGKLCPECRKGTLVDVIREGKSFKKCDHCAYELTS*