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cg1_0.2_scaffold_5490_c_6

Organism: CG1_02_FULL_novel_Archaea_34_218_curated

partial RP 32 / 55 MC: 5 BSCG 21 / 51 ASCG 30 / 38 MC: 2
Location: comp(2339..3226)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0002DE0B3A similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 299.0
  • Bit_score: 147
  • Evalue 1.90e-32
  • rbh
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 295.0
  • Bit_score: 590
  • Evalue 1.60e-165
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 299.0
  • Bit_score: 146
  • Evalue 9.20e-33

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 888
ATGGTTAGAGATAAAAAAGGAAGTTTGACTGATTATCTGAAAGATGTAGGCAGTTATTCCTTACTGACTAGAGAGCAGGAAATTGAGTTAGGAACTAGGTCATTTTATCATGGAGATAGAGTAGCGAGAGATACTCTTGTCGAGTCTAATCTAGGGTTTGTTGTTCACATTTCTAAACAATATCAAGGAAGAGGAGTTAATTTGGCTGATCTTGTTCAAGGTGGTAACTTTGGACTAATTAGGGCCGCAGAAAATTATGATCCAAATAAAGGAACTCGATTTACAACCTATGCAATTAAATGGATTAAATTAGGAGTCAGAAAGGTTATTGCAGACAATGGGATGAATCAGATAAGGACACCTACAGATGTTTTTATTTTAATACCTAAGGTAAAAAAATATCTTGTCCAATGTGAAGAAATGGAAGTTCAGCCAACTAGAGAAGGTTTATGTGAATATGTAGAAATGAATAGGCCCGTTGGAAATCTTGAACGCAAACCATTCAGTATTTCTGAGAAAAAATATAACCATCTTATTAATTTTATTGGAAAGTATAGGTTGAATGTGGATAGGCTTTTCGAAGCAGATGGAAATAAAAACACTTTCGAAGACGTTCGTGTAAGAGACCCTGTGGATATTGCAGGGAAAAATGAGGCTCTTGAAATTTTGGAGAAAATTTTACATGGTCAGTTTCGTTCAAAATATCATGTTTTGACAGATATTGAAATTGCTGTTTTAGAACAAAGATTTGCAGAGGATGTAATGACTTATGACGAGATTGGAAGAGATTTGGGCTTAACAAAAGAAAGGGTAAGACAGATAGAAATTCAAGCAAGAGAAAGAATAAAATCTTTTCTTGAGCATTCTTCTGGAAGGGTTTATAACTAA
PROTEIN sequence
Length: 296
MVRDKKGSLTDYLKDVGSYSLLTREQEIELGTRSFYHGDRVARDTLVESNLGFVVHISKQYQGRGVNLADLVQGGNFGLIRAAENYDPNKGTRFTTYAIKWIKLGVRKVIADNGMNQIRTPTDVFILIPKVKKYLVQCEEMEVQPTREGLCEYVEMNRPVGNLERKPFSISEKKYNHLINFIGKYRLNVDRLFEADGNKNTFEDVRVRDPVDIAGKNEALEILEKILHGQFRSKYHVLTDIEIAVLEQRFAEDVMTYDEIGRDLGLTKERVRQIEIQARERIKSFLEHSSGRVYN*