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cg1_0.2_scaffold_5490_c_11

Organism: CG1_02_FULL_novel_Archaea_34_218_curated

partial RP 32 / 55 MC: 5 BSCG 21 / 51 ASCG 30 / 38 MC: 2
Location: comp(5983..6291)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRR1_METIM similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 102.0
  • Bit_score: 113
  • Evalue 1.40e-22
  • rbh
transcription termination factor Tfs; K03057 transcription elongation factor Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 221
  • Evalue 5.00e-55
transcription termination factor Tfs similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 102.0
  • Bit_score: 113
  • Evalue 3.90e-23

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 309
ATGGAATTTTGTCCTAAATGTGGTAGTGTAATATTGGTTACTGATGGTAAGGCACGGTGTGCTAAATGCAATTATAAGCCAAAAGGTGTTTTTAAGGTCCAATCTTCTAAAGATATTAAGAAATCTGAGGGTGTTTTAGTCATAGATGAGAAAAAACTTAACACTTATCCCATAGTGGATATGTCTTGTTTAAAGTGTAAGGAGAAGAAAGCATATTTCTGGATATTGCAAACTAGGTCTGCAGATGAACCTGAGACTAAATTTTACAGGTGTGTTAAGTGTGAACATACTTGGAGAGAGTATAGGTAG
PROTEIN sequence
Length: 103
MEFCPKCGSVILVTDGKARCAKCNYKPKGVFKVQSSKDIKKSEGVLVIDEKKLNTYPIVDMSCLKCKEKKAYFWILQTRSADEPETKFYRCVKCEHTWREYR*