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cg1_0.2_scaffold_177_c_8

Organism: CG1_02_FULL_Pacearchaeota_39_14_curated

near complete RP 33 / 55 MC: 5 BSCG 25 / 51 ASCG 32 / 38 MC: 1
Location: 4791..5351

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) RepID=B1YM24_EXIS2 similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 175.0
  • Bit_score: 107
  • Evalue 1.40e-20
  • rbh
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Pacearch_03 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 373
  • Evalue 1.40e-100
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 175.0
  • Bit_score: 107
  • Evalue 3.90e-21

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Taxonomy

CG_Pacearch_03 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 561
ATGATAGCTCAGAGAGACGACCCCCTGGAGGACGAACAGCTGTTTAAAAGATACCAGAATGGGGAAAACAATGCCCTTGAAGTTCTTGCCTCAAAATATACTCCTCCTTTATTGGCATGTTTAAGGAGATTTGTAGGAGACTACGCAGAAGACTGCCTCCAAGAGACATTTCTGAGAATACATGAAAAAAAGCATCAATTTGATCCAGATAAGTCAGAAGTATTAACCTGGTTTTATGTCATCGCCCGTAATGTTGCCAGGGACACTCTAAGAAAAGAAAAAATAAGACCATTTTACGGCCTGACTTTAAATGAAAGGCTTACAGGCACAAGCCAGGACAACTCTGAAGAAGAAATATCAGAAATTATTGAAAAAGATATCAAAAGGCTTCCTCCTAAATATCAGGATCTGATTAACATGGTATACTTTAGAGGTAACAGTCTGAGAAATATCTCAAGATCACTTAACCTCCCTCTTGGAACAGTGAAAAGAAGGTTGAACCTAGCTCTAGCAGTTTTAAGAAAAAAGATGGACAAAAGCGTTTATCAGCCGGCTGCTTGA
PROTEIN sequence
Length: 187
MIAQRDDPLEDEQLFKRYQNGENNALEVLASKYTPPLLACLRRFVGDYAEDCLQETFLRIHEKKHQFDPDKSEVLTWFYVIARNVARDTLRKEKIRPFYGLTLNERLTGTSQDNSEEEISEIIEKDIKRLPPKYQDLINMVYFRGNSLRNISRSLNLPLGTVKRRLNLALAVLRKKMDKSVYQPAA*