ggKbase home page

cg2_3.0_scaffold_33594_c_4

Organism: CG2_30_FULL_Roizmanbacteria_OP11_33_16_curated

near complete RP 44 / 55 MC: 1 BSCG 43 / 51 ASCG 6 / 38 MC: 2
Location: 2910..3161

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 84.0
  • Bit_score: 125
  • Evalue 3.10e-26
tjr:TherJR_2302 RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor id=4882 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 83.0
  • Bit_score: 118
  • Evalue 3.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OP11_Roizmanbacteria_41_18 → Roizmannbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 252
ATGCTAATTTCAAAAATTCCAAAAACTTGGAAAGAATTATTAAAGCAAGGTGAGTCTGATGGGTTTATTGTTCAGGATGACATTTTAATTATCTGTGTAGATCCGGAAAAACACATTCAAGAAATTGATGATTTCTTTGATCAGGTGTTGAAAAAGGGGATTGATATTTTTGAAACCATATCCACCCGAGAAGAGATAGATGCAAAAAAAAGTGTTGAAGAAATGGAAAAAGAAATCGAACAGATTGTCGGA
PROTEIN sequence
Length: 84
MLISKIPKTWKELLKQGESDGFIVQDDILIICVDPEKHIQEIDDFFDQVLKKGIDIFETISTREEIDAKKSVEEMEKEIEQIVG