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cg2_3.0_scaffold_12646_c_7

Organism: CG2_30_FULL_Roizmanbacteria_OP11_33_16_curated

near complete RP 44 / 55 MC: 1 BSCG 43 / 51 ASCG 6 / 38 MC: 2
Location: comp(5675..6769)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=CG_Roizman_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 661
  • Evalue 6.80e-187
tjr:TherJR_2302 RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor id=4882 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 364.0
  • Bit_score: 605
  • Evalue 3.10e-170
  • rbh
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 356.0
  • Bit_score: 388
  • Evalue 2.20e-105

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Taxonomy

CG_Roizman_01 → Roizmanbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1095
CTTATGCTAATTTCAAAAATTCCAAAAACTTGGAAAGAATTATTAAAGCAAGGTGAGTCTGATGGGTTTATTGTTCAGGATGACATTTTAATTATCTGTGTAGATCCGGAAAAACACATTCAAGAAATTGATGATTTCTTTGATCAGGTGTTGAAAAAGGGGATTGATATTTTTGAAACCATATCCACCCGAGAAGAGATAGATGCAAAAAAAAGTGTTGAAGAAATGGAAAAAGAAATCGAACAGATTGTCGGATTAAAACACGGTGAGTCGCTTGATCCAATAAAAAAATATCTTAAAGAGATTGGACGAACGCCACTTTTAAAATTTGAACAAGAAGTTGATTTAGCAAAAAAATATGAAAAAGGTAATCAGCATGCAAAAGACGCATTAATTAAAGCCAACCTTCGTTTGGTTGTTTCGATTGCAAAAAAATATCTGGGAAGAAGATTAACTTTTCTTGATCTAATTCAAGAAGGAAATAAGGGTTTAATTCGTGGTGTAGAAAAATATGATTGGCGTCGGGGATATAAATTTTCAACCTATGCCACATGGTGGATTAGACAGGCAATCACCCGTGCAATTGCCGATCAATCACGCACAATTCGTATTCCTGTACACATGGTTGATCAAATAAATAGGCTATACAAAACTCAAAGGCGCTTAACGCAAAAGATTGGAAAAGAGCCAACCATAAAAGAAATTGCCAAAGAAATGGAACAGACAACCGAAGAGATCGAACATTTGTTAAAAATTTCTCAACAACCAAAATCACTATCCACCCCAATTGGTGATGATAAAGAAGCAACGCTTGAGCAGTTTGTAGCTGATCAAAATCAACCAATGCTCTACGATACAGTTTCACGTGAACTATTAAAAGATGCCCTCGGAAAAGTATTGGAAACACTCTCTCCTCGTGAAAAAAGAGTTTTGATTATGCGTTTTGGATTGGAGGATGGTAAACCAAGAACATTGGAAGAGGTGGGTCGAGAGTTTAAAGTAACACGGGAAAGAATTCGTCAAATCGAAGCAAAAGCAATTAGAAAGTTAAAGCATCCAACACGTGCTCGCAAGCTTAAGGACTTTTTAGAATAG
PROTEIN sequence
Length: 365
LMLISKIPKTWKELLKQGESDGFIVQDDILIICVDPEKHIQEIDDFFDQVLKKGIDIFETISTREEIDAKKSVEEMEKEIEQIVGLKHGESLDPIKKYLKEIGRTPLLKFEQEVDLAKKYEKGNQHAKDALIKANLRLVVSIAKKYLGRRLTFLDLIQEGNKGLIRGVEKYDWRRGYKFSTYATWWIRQAITRAIADQSRTIRIPVHMVDQINRLYKTQRRLTQKIGKEPTIKEIAKEMEQTTEEIEHLLKISQQPKSLSTPIGDDKEATLEQFVADQNQPMLYDTVSRELLKDALGKVLETLSPREKRVLIMRFGLEDGKPRTLEEVGREFKVTRERIRQIEAKAIRKLKHPTRARKLKDFLE*