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cg2_3.0_scaffold_13653_c_5

Organism: CG2_30_FULL_Gracilibacteria_GN02_37_12_curated

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 ASCG 6 / 38
Location: comp(4381..4851)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=CG_GN02-02 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 156.0
  • Bit_score: 307
  • Evalue 8.20e-81
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 157.0
  • Bit_score: 304
  • Evalue 4.90e-80
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 151.0
  • Bit_score: 178
  • Evalue 1.50e-42

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Taxonomy

CG_GN02-02 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGGTAGAAACTATCAACCGATTTACTCACACTTTCCGACGACTCACTCAGGAACTTGCTCGAGAACCTCTCATGGAGGAACTTGCTCTGGAGCTCGATATGGATATCCGAAAAGTACGCCAGATTATGCGTATATCTCAGGATATTCTCTCACTCGATTCTCCTGTAGGAGGTGAGGAAGATACGACTCTTGGAGACTTCGTGGAGGATGATAAATACCTCACACCAGATAAAGCAGCAAACCTCACACTTCTGAAAGAAAATCTCTACGAGATGCTCGATTTTTTAACTCCTCGTGAACGCAAAATCGTCATCATGCGATTCGGGCTCGATGGAGGAGAAATCCATACTCTCGAAGAAGTCGGAAAAGAATTCGGAGTAACCCGAGAGCGTGTTCGTCAGATCGAAGCGAAGACCCTCGAGAAACTCAAAAGTCACCCAAGTGCCGATAAAATACGGTTTTTTAATTAA
PROTEIN sequence
Length: 157
MVETINRFTHTFRRLTQELAREPLMEELALELDMDIRKVRQIMRISQDILSLDSPVGGEEDTTLGDFVEDDKYLTPDKAANLTLLKENLYEMLDFLTPRERKIVIMRFGLDGGEIHTLEEVGKEFGVTRERVRQIEAKTLEKLKSHPSADKIRFFN*