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gwd2_scaffold_540_23

Organism: GWD2_OD1_38_11

near complete RP 42 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(17662..19179)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ52071.1}; TaxID=1618941 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_38_11.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 505.0
  • Bit_score: 964
  • Evalue 6.80e-278
RNA polymerase, sigma 38 subunit, RpoS KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 370.0
  • Bit_score: 406
  • Evalue 8.40e-111
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 406
  • Evalue 1.00e+00

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Taxonomy

GWD2_OD1_38_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGCCTATCGGCAGGCAGGTTGTAATAAAAAAATCGATAAAAAAGACTGTTAAGGCAGCATCGAAAAATGCTAAAAAAACAGTTGCTGTTAAGTCCAAACCTAAAAAAGTTGTAAAATTTATTAAAGCAAAAAAAATCGTGCAGAAAAAAAATAAGAAAATCGTACAGAAAAAAGTTCCTGCCCGCAATGCTACGCATAGCGTTGCAGGCGGGGTTGTAAAAAAAGTAGCAGCAAAAAAAGCAGTAATTAAAAAAGCAGTTGTAAAAAAAATACAACCTGTTAAGAAAGTTGCACCAAAAAAAGCTACAACATCGGCAAAGCCAGTAGTTGCAAAAACAACTGTAAAGCCTAAGAAAATCGTTGAAAAAGTTCCTCAGCCAAAGAAAAAAGCAGCGGTAGTTGCTCAAGAAGAAGGGGAAAATAAAGTTAATATTATTGCAGAGCTTATTGCGCGTGGAAAACAACGCGGTTTTGTAACGGAAGATGAAATCATCCACCTTATTCCGGAAGTTGAGGAAGAACTTGATGAGCTTGAAAATCTGTATGAGCAATTGGAAACTGCTGGAGTTAAGGTTGTCGTTTCTGATGATATGCTTAAGATTGATTCAGACAAGGAAGCTGAAATATACGAGAAAAGCAAGAAGGATAAAAATGCAGATTCAAATTTGTTGGATGGAATAGAGGACAGTTCTTCTGACCTTGTGCAAATGTATCTTCGTGAAATTGGACGTGTGCCACTTTTAAAATCTGAAGAAGAAATAAAACTTGCTAAAGCCAATGAAAAAGGGGATTTGGCATCCAAACAAAAACTGACTGAAGCAAATCTTCGCTTAGTGGTGAGTATTGCAAAAAAATATGTTGGACGTTCACATAATCTTTCACTGTTGGATTTGATTCAGGAAGGAAATATTGGACTATTTCGCGCTGTAGAAAAATTTGATTATCGAAAAGGTTTTAAATTTTCAACATATGCAACTTGGTGGATTCGCCAAGCAATCACCAGGGCGCTTGCTGATCAGTCGCGCACAATTCGTATTCCTGTGCATATGGTGGAAACCATTAATAAATATACCCAGATTACTCGAAGATTGGTGCAGGAATTGGGACGCGAACCTTTGCCGGAAGAAATTGCAGCTGAAATGAATTTGGAAGTAGATAAGATTCGTCATATTCAAAAAATTTCTCAAGAAACAGTTTCACTTGAAACTTCAGTGGGGGATTCTGATGACGACAGTGTGCTTGGTGATTTTATTGAAGACACTGAAACAGTGATGCCTCACCAAGTGGCTTCAAGAAAACTTCTTAAAAACCATGTCGGGGAAGTTCTTCATGATCTTACTCCGCGCGAACAAAAGATTCTTAAAATTCGTTTTGGTCTGGAGGATGGTGTGACGCATACTTTGGAAGAAGTAGGAAAAGAATTTGGAGTAACCCGCGAACGTATTCGTCAAATTGAAGCCAAAGCTCTCGACAAAATTCGTCAACACGGTTCTATCAGCAAACTTAAAGACTACTAG
PROTEIN sequence
Length: 506
MPIGRQVVIKKSIKKTVKAASKNAKKTVAVKSKPKKVVKFIKAKKIVQKKNKKIVQKKVPARNATHSVAGGVVKKVAAKKAVIKKAVVKKIQPVKKVAPKKATTSAKPVVAKTTVKPKKIVEKVPQPKKKAAVVAQEEGENKVNIIAELIARGKQRGFVTEDEIIHLIPEVEEELDELENLYEQLETAGVKVVVSDDMLKIDSDKEAEIYEKSKKDKNADSNLLDGIEDSSSDLVQMYLREIGRVPLLKSEEEIKLAKANEKGDLASKQKLTEANLRLVVSIAKKYVGRSHNLSLLDLIQEGNIGLFRAVEKFDYRKGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKYTQITRRLVQELGREPLPEEIAAEMNLEVDKIRHIQKISQETVSLETSVGDSDDDSVLGDFIEDTETVMPHQVASRKLLKNHVGEVLHDLTPREQKILKIRFGLEDGVTHTLEEVGKEFGVTRERIRQIEAKALDKIRQHGSISKLKDY*