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gwc1_scaffold_8430_3

Organism: GWC1_CPR2_39_9

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38 MC: 3
Location: comp(1221..4952)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_CPR17-01 UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 999.99
  • Bit_score: 2283
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 999.99
  • Bit_score: 1305
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1293
  • Evalue 0.0

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Taxonomy

CG_CPR17-01 → CG_CPR17 → Bacteria

Sequences

DNA sequence
Length: 3732
ATGGATAAAGCAGTGTTCGATGCCGTCCGATTAGCTATTGCCTCTCCGGAGGAAATTTTAGACTGGTCACATGGCGAAGTTACCAAACCGGAAACCATTAATTATCGTACCCAAAAACCGGAAAAAGACGGATTGTTTTGCGAAAGAATTTTTGGTCCGACTAAAGACTGGGAATGTTATTGCGGTAAGTATAAAAGAATCAGATATAAGGGTATTATCTGTGATAAATGCGGCGTAGAAGTTACAAGGTCAATTGTTAGGCGTGAAAGACTGGGACACATTAAGCTTGCCGTTCCTGTAACCCATATCTGGTTTTTAAGAGGCGTGCCGTCTTCAATTGGTACAGCCTTAGATATTGGCGTTAAAGATTTAGAAAAAATTGTCTATTTTGCAAGCTACGTTATTACCAGTGTTAATGACGAAGCAAAATACAGGGCTTTGGCTTCTTTAGAAGAAGAATTTAAATCTAAAAAAGAAGAACTGGCCAAAACCGCCGAAGAAAAAACCGAAGATCTGCTTTCAGCTCAGGGAACCAATTTGCAGTCTATTCGCGATAATGCTAAGTCGGATCTTGAGTCTATTGCTCCGGGTCAGCTTCTAAACGAATTAAAGTATAGAGAGCTTGCCATGAAACACGGTGAAGTCTTTACTGCCGGTATGGGCGCTGAGGCAATTTTAGAACTCCTAAAAGGAATTGACTTAGAAAAAATTGTCACTGATTTGAAAGAAGAAGTTGACAACACCCAGGGTCAGCGAAAAAAGAAAGCCTTAAGAAGATTAAAACTTCTAGAAGGTATGCAGGCAGCCGTTATTAAACCGGAATGGATGATCATGTCTGTTCTTCCCGTTATCCCGCCGGATCTTAGACCGATGGTTCAGCTTGATGGCGGTCGTTTTGCCACTTCAGACTTAAACGACCTTTACAGAAGAGTCATAAACCGAAATAACCGTCTTCGAAAATTGATTGAAATGGATGCTCCAGACATCATTTGTAGAAATGAAAAAAGAATGCTTCAAGAAGCTGTTGATGCTTTAATTGACAATTCTGCCAGACGTGAAAAAGCGGTGGCATCTTCCGGAGCCAGAAGAAAATTAAGATCTTTAGCGGACATGCTTAAAGGAAAACAGGGACGATTTAGGCAAAACCTTCTTGGTAAAAGAGTAGATTATTCCGGAAGGTCTGTAATTGTTTGCGGTCCGGAACTTAGACTTCAGCAATGCGGTATTCCGAAAATGATGGCCTTAGAATTGTTTAAGCCTTTTGTCATTTCCAGACTAATTGCGGAAGGTTATGCTCATAACGTTAAAAGCGCTTCCAGAATGATAGAAAAGAGCCGAACGGAAGTTTGGGACGGCTTAGAGGAAGTCATTAAAGAAAAACATGTTTTATTAAACAGGGCACCAACCCTTCACCGTCTTGGTATTCAGGCTTTCCAGCCAGTTCTGATTGAAGGCAAGGCTATTAAGATCCATCCGCTCGTTACCTCAGCATTTAACGCTGACTTTGACGGAGACCAAATGGCAATTCACGTTCCGTTATCCAGAGCCGCTCAGGAAGAGGCCAGAAATATCATGCTTTCTTCTAATAACCTCCTAAAACCAGCAGCCGGCGAACCAATTGTTATGCCAACCAAAGACATGGTTATGGGTTGTTACTACTTAACAATTGAAAGACCGGATCAAATTGGTACCGGCAGAAGTTTTTCTACACTAGACGAAGTGATTATGGCCTATGAACTTGAGCAGGTTACCTTAAATGCCAATATCAAAGTTAAATTTGATGGTACAGTTTATGATACCACTGTTGGCAGAGTTATCTTTAATAAAATTTTGCCAAGGGAGCTTCAGTTTTCAAATGAAGCCTTAGATTCTAAAAAGTTAGGAAAAATAGTTGCCAGATCATATAAAGAACTAGGCAGAGAAGCGACCGCAAAACTAGTTGATGATATTAAGGACCTAGGTTTCGAATATGCTACCATTTCCGGATTATCCATGGCAGTGGCCGATATTGAAACTCCGCCAAGGAAAAAGGAAATCTTAGATGAAGCCGAAAACAAAATTATCGAAATTGATAAGCAGTTTGCCCGTGGCTTAATTACCGAAAAAGAAAAATATGAGAAAGCGGTGGAGTTATGGGAAAAGGTTAAAGACCAAATTCAAGACGACATTAAAGCCAATTTAAATCCTTATACCAGCATTTCTATGATGGTTAGTTCCGGTGCCAGAGGTAAAGTTGAACAGTTAACCCAGATGGCCGGCATGAAGGGCTCCGTGGTATCGCCAACCGGTGCAATTATCGAGCTTCCGGTTAGATCAAACTACAAAGAAGGCTTAACCGTGCTGGAGTATTTCATTTCAACCCACGGCGCCAGAAAAGGCTTATCTGACGTGGCCCTTCGAACTTCCGACTCCGGTTACCTAACCAGAAGGTTGGTTGATGTGGCTCAAGACGTGATTATTACCGAAAATGATTGTAAAGATAAAACCGGAATTACGGTTTCTAAAAATGATACTAAAGCAATTGGCGAAAGTTTTGCCGAAAGAATTCAGGGACGGGTTGTAACCAAAAAAGTTGTTGATCCCGAAACCGGCGAAGTTTTAGTCAAAGAAAATCAGTTAATTTCCGAAGAAGTTGCAAAAGAAATCGAAAATTCAAAAATTGATAAAATAGACATCAGATCAGTTCTTACTTGTAAAATCAAATGGGGTGTCTGCCAAATGTGCTATGGTACCAACCTGGCTACTGCCGAACTGGTAAAACTTGGTGACGCTGTCGGTATTATGGCTGCCCAGTCTATTGGCGAGCCGGGAACTCAGCTTACCATGAGAACCTTCCATACCGGCGGTGTGGTGGGTCTTGATATTACCCAAGGTCTTCCAAGGGTTGAAGAATTATTTGAGGTCAGAAACCCTAAGGGTGAAGCTGTTCTGGCCGAACTTGAAGGTAAGGTCTTGATTAAAGAAGGCGAACACCGAAAAACCATCAGAATTATTTCTGATGCAATCGAAGAAGACAGCTTTAATATTAAAGATATGACTGTTGAAGTGAAAAGTGGCGATAGGGTAACGCCAACTACTGTTCTTTTCACTAAAAACGGCAAAAAACCCGTTAAGGCTAAAAATGCCGGAAGTGTTCGAATTGATGGTGACAAGCTTTATGTTGCTAAAGACGCCGAAGCTAAAGAATACGAGGTTCCGTTGCAAACCACAATGAAAGTTGAAGACGGCGAGAAGGTAGAAAAAGGTCAACCGCTAACTGAAGGTTCCTGGAATTTGCAAACCGTTTTAAAACTTCTAGGCGAAAGAGCAGTTCAGGAATATGTAATTGCTGAAGTAAAACAAATTTACGCTTCGCAGGGGCAGTCCATTAACGATCGCCACATAGAAATCATTGTTAAGCAGATGTTCTCCAGATATCAGGTAGAAGATGGCGGAGATACTTCTCTTACTTCCGGTCAAATTGTGTCAAAATATATGTTTGAAAAAGAAAATGAAGCCGCAAAAAATGCTGGCGGCAAAGAAGCTGACGCACAAAAACTGCTGCTGTCTATTACTAAAGTTTCATTGTCAACAGATTCGTTTTTATCCGCAGCTTCATTCCAGGAAACATCAAGAATCTTAATTGACGCGGCTACCAGAGGAAAAATTGACGAGCTAAGAGGTCTTAAGGAAAACGTCATTATCGGTAAACTAATTCCGGTTGGTACAGGATTCAGACACAAGAAATATTAA
PROTEIN sequence
Length: 1244
MDKAVFDAVRLAIASPEEILDWSHGEVTKPETINYRTQKPEKDGLFCERIFGPTKDWECYCGKYKRIRYKGIICDKCGVEVTRSIVRRERLGHIKLAVPVTHIWFLRGVPSSIGTALDIGVKDLEKIVYFASYVITSVNDEAKYRALASLEEEFKSKKEELAKTAEEKTEDLLSAQGTNLQSIRDNAKSDLESIAPGQLLNELKYRELAMKHGEVFTAGMGAEAILELLKGIDLEKIVTDLKEEVDNTQGQRKKKALRRLKLLEGMQAAVIKPEWMIMSVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLRKLIEMDAPDIICRNEKRMLQEAVDALIDNSARREKAVASSGARRKLRSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVCGPELRLQQCGIPKMMALELFKPFVISRLIAEGYAHNVKSASRMIEKSRTEVWDGLEEVIKEKHVLLNRAPTLHRLGIQAFQPVLIEGKAIKIHPLVTSAFNADFDGDQMAIHVPLSRAAQEEARNIMLSSNNLLKPAAGEPIVMPTKDMVMGCYYLTIERPDQIGTGRSFSTLDEVIMAYELEQVTLNANIKVKFDGTVYDTTVGRVIFNKILPRELQFSNEALDSKKLGKIVARSYKELGREATAKLVDDIKDLGFEYATISGLSMAVADIETPPRKKEILDEAENKIIEIDKQFARGLITEKEKYEKAVELWEKVKDQIQDDIKANLNPYTSISMMVSSGARGKVEQLTQMAGMKGSVVSPTGAIIELPVRSNYKEGLTVLEYFISTHGARKGLSDVALRTSDSGYLTRRLVDVAQDVIITENDCKDKTGITVSKNDTKAIGESFAERIQGRVVTKKVVDPETGEVLVKENQLISEEVAKEIENSKIDKIDIRSVLTCKIKWGVCQMCYGTNLATAELVKLGDAVGIMAAQSIGEPGTQLTMRTFHTGGVVGLDITQGLPRVEELFEVRNPKGEAVLAELEGKVLIKEGEHRKTIRIISDAIEEDSFNIKDMTVEVKSGDRVTPTTVLFTKNGKKPVKAKNAGSVRIDGDKLYVAKDAEAKEYEVPLQTTMKVEDGEKVEKGQPLTEGSWNLQTVLKLLGERAVQEYVIAEVKQIYASQGQSINDRHIEIIVKQMFSRYQVEDGGDTSLTSGQIVSKYMFEKENEAAKNAGGKEADAQKLLLSITKVSLSTDSFLSAASFQETSRILIDAATRGKIDELRGLKENVIIGKLIPVGTGFRHKKY*