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gwc1_scaffold_1439_32

Organism: GWC1_OD1_44_10

near complete RP 38 / 55 BSCG 44 / 51 MC: 1 ASCG 10 / 38
Location: comp(21680..22243)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKT57088.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23. UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 371
  • Evalue 7.20e-100
RNA polymerase, sigma-24 subunit, ECF subfamily KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 171.0
  • Bit_score: 111
  • Evalue 2.10e-22
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 111
  • Evalue 2.00e+00

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAATCGCTCGGACGCGGAGCTTGTGGCCGACCATCTTTCTGGCAATGAAAAATCGCTGGAGGTTTTGATTAAACGGAATCTTAAGCCTGTTTACGGTTTTGTGTATAAATACGCCGGCAACGCAGAAAATTCGGAAGATATCACCCAAGACGTTTTTGTGAAAATGTGGAAAAATCTTAAGCGATTTGATCAGAACAAAAATTTCAGAACATGGCTTTTTGCCATTGCCAAAAATTCGGCGATTGATTTTCTCAAGAAAAAAAAAGCCGTGCCCTTCTCCGAATTCGAGAACAAATACGGAGAAAATGTGATCGCCGAAACTTTTCGCGATCTCTCGCCTATCCCGTCGGAACTCTCGGAAAGAAAAGAGAAATACCGCTGCCTCGCTTTAGTGGCAGCAAAACTGCCGCAGAAATACGGGGAAGTGCTTTCTTTAAGATATGATAAGGACCTATCTTTTTCGGAAATTGCGCGATTTTTGGGCGAAAAACTAAACACCGTCAAAAGCCGCCATCGCCGGGCAATTATGATTCTGAAATCGGTCTTTTTGCGCCAAAAATAA
PROTEIN sequence
Length: 188
MNRSDAELVADHLSGNEKSLEVLIKRNLKPVYGFVYKYAGNAENSEDITQDVFVKMWKNLKRFDQNKNFRTWLFAIAKNSAIDFLKKKKAVPFSEFENKYGENVIAETFRDLSPIPSELSERKEKYRCLALVAAKLPQKYGEVLSLRYDKDLSFSEIARFLGEKLNTVKSRHRRAIMILKSVFLRQK*