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RifSed_csp2_19ft_3_scaffold_28041_3

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1746..3425)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E id=3787215 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 573.0
  • Bit_score: 586
  • Evalue 1.80e-164
type II secretion system protein E (GspE) similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 562.0
  • Bit_score: 449
  • Evalue 7.30e-124
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 559.0
  • Bit_score: 1083
  • Evalue 0.0

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Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1680
ATGAAACTCCCTATTGAAGCACTCAAAAAAATCTTGGTTGACTCCGGCTATGTGCCTGAAAAGGATTTTGATGAGGCTGCCAAGTCTTCGCAGGAGCTTGGCAGAAGTGCCGAAGACATTTTGATATTTAAAGGCTTTTTAAGTGAATCTACGCTGGGACAATTGGTTGCAGAGCATCTAAAGGTCCTGCACGCGAATCTTAACCACAAAGTTACCGCCGACGAAGTCTTACGGCTCATACCGGAAAAGACCGCGAGGAGCTACCGTATCCTTGCGTTTGACAGGCAGGATAACAAGCTTAATCTTGCGATGGAGGATCCGTCGGACTTTGAGGCGATTGAATTTGCAAAACGCCAAACCGGCCTCGAAATTGTGCCGTATTATGCCGGCCCGGATGAGATGCGGAAAGCACTGGGTCAGTATAAGAAAAATATTAGAGAGGAATTCGATAAAGTAATTGAAGAAAACGTTAGCAAGACTAAGCTTGAAAAAGACCCTGCCAAGGCAGCGGAAGAGCTGCCGGTAATTAAAATTCTGGATACTATTTTCGAGTTTGCGGCTGCAGAGAGGGCAAGTGACATTCATATCGAAAGCTATTCCGAAGAAGTGGTCGTGCGGTTTAGGATCGACGGCATACTTCGCGACATCATCCGCCTTCCCAGAGGAATTGAGATTGCTTTGGTGGCCAGGATAAAAATTCTGTCAAATCTCAAAATTGACGAGCATAGAATTCCTCAAGACGGCAGACACAGGTTTAGTATTGACGACGATACGATTGCTTTGAGAATCTCGATCATACCGGGTTTTTATGGCGAAAATGTGGTTATGAGGCTGTTGCCCGAAACCAGCAGGCCACTGAGCTTGGAGGAATTGGGACTTACGGGCAAGGGTCTGGAAGTGGTCAGAGATAATATAACAAAACCCAATGGCATGCTTTTGGTGACCGGCCCTACGGGTTCGGGTAAGACAACGACTCTTTATTCGATACTGAATATTTTAAATACTGTAAAGGTCAAAATTTGTACCATCGAGGATCCTATTGAGTATGGAGTAAAGAGGGTTAGCCAGATTCAAGTAAACCCAAAGGCCGGGCTGGATTTTGCAGCAGGCCTTCGCTCTCTGCTTAGGCACGACCCGGACATAATTATGGTAGGTGAAATTCGAGACAGAGAAACCGCAGAGATTGCCGTCCACTCAGCCTTGACCGGGCATTTGGTCCTGTCGACGCTGCATACCAATACCGCGGCTGGTGCAATCCCAAGATTTTTGGATATGGGCGTTGAGGGTTATTTATTGGCTTCAACGGTCAACGCGGTAATCGCCCAGAGGCTGGTTCGAAAAATTTGTACAAGTTGCATCACTGAATACTCTCCCGATGAAAATACGTTGGGGCCGTTTGTAAAGGAATTTAACCTTAACCTCAAAGACCAGAAATTTTACCGTGGTACGGGGTGCGGCGAGTGTCACAAGTCGGGATACGCGGGCAGAATCGGAATTTACGAAGTGATGCGGGTGTCTGAAAGTATTCGCAAATTGATTACTCAAAAGTCCGCCCTGGATGATTTAGAGACACTCGCGGTTAAGGAAGGGATGCTGACAATGCTTGCAGACGGGTTAAATAAAGTTTCAAGCGGGTTGACTACGATAGACGAAATGATAAGAGTCGTAAGGGAGAGTTGA
PROTEIN sequence
Length: 560
MKLPIEALKKILVDSGYVPEKDFDEAAKSSQELGRSAEDILIFKGFLSESTLGQLVAEHLKVLHANLNHKVTADEVLRLIPEKTARSYRILAFDRQDNKLNLAMEDPSDFEAIEFAKRQTGLEIVPYYAGPDEMRKALGQYKKNIREEFDKVIEENVSKTKLEKDPAKAAEELPVIKILDTIFEFAAAERASDIHIESYSEEVVVRFRIDGILRDIIRLPRGIEIALVARIKILSNLKIDEHRIPQDGRHRFSIDDDTIALRISIIPGFYGENVVMRLLPETSRPLSLEELGLTGKGLEVVRDNITKPNGMLLVTGPTGSGKTTTLYSILNILNTVKVKICTIEDPIEYGVKRVSQIQVNPKAGLDFAAGLRSLLRHDPDIIMVGEIRDRETAEIAVHSALTGHLVLSTLHTNTAAGAIPRFLDMGVEGYLLASTVNAVIAQRLVRKICTSCITEYSPDENTLGPFVKEFNLNLKDQKFYRGTGCGECHKSGYAGRIGIYEVMRVSESIRKLITQKSALDDLETLAVKEGMLTMLADGLNKVSSGLTTIDEMIRVVRES*