ggKbase home page

RifSed_csp2_19ft_3_scaffold_81698_2

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1530..2207)

Top 3 Functional Annotations

Value Algorithm Source
winged helix family two component transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR id=29022 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 225.0
  • Bit_score: 443
  • Evalue 7.50e-122
  • rbh
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 220.0
  • Bit_score: 205
  • Evalue 9.70e-51
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 225.0
  • Bit_score: 443
  • Evalue 1.00e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 678
ATGAAAGTTCTGATTATTGAAGACGACCGGACTCTGGCCAAGAACCTCAAACAGGTATTGGTAAAGGCCGGGTTCGCCGTTGATACAGCGAATACCCGAGAAAATGGCCTGGCTGAAACTGAAATAAACGAGTATGACTGTATAGTGCTTGATATCAACCTGCCTGACGGCAGCGGCTTTGATCTCCTTGACGACCTAAGAAACACTGGAAACAAAACCCCGGTCATTATTGTAACGGCCAGAGGGCAAGTGGAAGATCGTATCAAAGGCTTAAACATCGGCGCCGATGATTATGTTCCCAAACCGGTTGATTCAAACGAACTAATTGCCCGCATCAGGGCGGTTATCAGGAGAAACACCCAAAGTGCCCTGCCAGTGCTTACTATCGGCAATCTGGTGGTAAAACCGGCGCAACACACCGCAACAGCAGGCAAGCATGTGCTTGATTTAACCGCTAAAGAGTTTGCCGTGCTTGAATACTTAGCACAACATAATGGTCAGATTATTACCAGAGCCATGCTCATGGAACATGTCTGGGGCAGCGACTTTGAAACTTTTTCCAATGTCATTGATGTCTATATTCGTAACCTAAGAAGAAAATTGGAAAGCCATACACCAACCGGTCTCATCAAAACAATCCGTGGCAAAGGCTATATTTTGGGGAAAAATGAAGAATAA
PROTEIN sequence
Length: 226
MKVLIIEDDRTLAKNLKQVLVKAGFAVDTANTRENGLAETEINEYDCIVLDINLPDGSGFDLLDDLRNTGNKTPVIIVTARGQVEDRIKGLNIGADDYVPKPVDSNELIARIRAVIRRNTQSALPVLTIGNLVVKPAQHTATAGKHVLDLTAKEFAVLEYLAQHNGQIITRAMLMEHVWGSDFETFSNVIDVYIRNLRRKLESHTPTGLIKTIRGKGYILGKNEE*