ggKbase home page

RifSed_csp2_16ft_2_scaffold_67128_10

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(8300..8791)

Top 3 Functional Annotations

Value Algorithm Source
Two component LuxR family transcriptional regulator (Fragment) n=1 Tax=uncultured bacterium RepID=K2C481_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 318
  • Evalue 3.40e-84
  • rbh
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 128.0
  • Bit_score: 66
  • Evalue 6.70e-09
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 318
  • Evalue 4.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 492
ATGTACGGGATAAGCCCGACCCAGTATGCCGTAGTGGGACTGATATCTAGAGGAAAAACGAATCAAGAGGCTTCAACCTATTTGAATATGAATTATCAAACGGTTAAAAATCATATTAGCGAAGTGTTAATAAAACTTAATCATCAAGGCGAAAACGATCTGTACGACCGCACTCAGATAGCGATCGTTGCCATAAGAGAAGGATTATTTCCCCCATCCCTTATTACGCGTTTGCCGGAATCAAGCAAGATTCCCCGCCTTTCGCTATTGTCTGATCGGGAATCCGAAGTCTTCGAATGTCTCGTACAAGGAATGGTAAATAAGGAGATTGGAACAGCTCTGACAATTTCTGCACAGACTGTAAAGAATCATGTTGCTTCAATCCTGCAGAAACTGCGCTGCCGAAGCCGTCATGAAGTGATGCTCATTGGTACGGTTGATGCGCTCCGCAGAAGTACCATAGTACCGGAACTTTTCTCACATTCGCGTTGA
PROTEIN sequence
Length: 164
MYGISPTQYAVVGLISRGKTNQEASTYLNMNYQTVKNHISEVLIKLNHQGENDLYDRTQIAIVAIREGLFPPSLITRLPESSKIPRLSLLSDRESEVFECLVQGMVNKEIGTALTISAQTVKNHVASILQKLRCRSRHEVMLIGTVDALRRSTIVPELFSHSR*