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RifSed_csp2_16ft_2_scaffold_120312_1

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(3..461)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 5..27 id=52077 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 155.0
  • Bit_score: 101
  • Evalue 6.20e-19
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 153.0
  • Bit_score: 308
  • Evalue 2.70e-81

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 459
ATGTTGCGCAAACTCGGGGTAGCGCATTTGAAGGTTCTTCTCATTTATCTCACAGTAGTGACAATCTTGCGCTGGGAGTTTCCTCATAGTTTCGGCGCTTTTTTTGATTTGGTCGGATTGTGGGTGGGTGGTGTTATCGGATTGGGACTGTTGGGGCTGGATCGCGTCCTGTATGTCTATGTCATTCGACCCCATGAACAGCTTTCACAGCAGATCCAAGAAAAGGTTCGGACTCAACACTGGAAGGAGGCTTTGGAGACGCTTCTTGCACGGAGGAAAGAGCAGTATCACTTGGCTTTCCGCAATGGCATCTTTGCTTTGGTGTACATCCCGGTCGTTTTTTTCGCAGTGACGAGTTCTTCGGGGCTTTTCGGCAAAGGCGTTGCTTTGGGTGTGATGGTGCATCTTCTTCATGATATCTGGAGGGATCAACTCAAAAATCCAAGCGAGTTGAACTCA
PROTEIN sequence
Length: 153
MLRKLGVAHLKVLLIYLTVVTILRWEFPHSFGAFFDLVGLWVGGVIGLGLLGLDRVLYVYVIRPHEQLSQQIQEKVRTQHWKEALETLLARRKEQYHLAFRNGIFALVYIPVVFFAVTSSSGLFGKGVALGVMVHLLHDIWRDQLKNPSELNS