ggKbase home page

RifSed_csp2_16ft_2_scaffold_120312_7

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(2619..3125)

Top 3 Functional Annotations

Value Algorithm Source
pth; peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=15191051 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 160.0
  • Bit_score: 127
  • Evalue 1.20e-26
Aminoacyl-tRNA hydrolase (EC:3.1.1.29) similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 163.0
  • Bit_score: 93
  • Evalue 4.00e-17
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 167.0
  • Bit_score: 343
  • Evalue 1.40e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 507
GTGGGTTTTTTAGGGGTTGATTTATTGGCGGAGCGGTTGCACTGCGACCCGTGGAAGGAGAGCAGGCACGGTAAGCTTTTTTTCGCGTGGAGTGAGGTTGACGGAGAGCGGGTGGAGTTGATTAAACCATTCACGTTCATGAATGCATCGGGAGTTGCACTCGCGTACGCCTTTCAGAAAAACCAGAATCTCCGTCTGGATAATTTGTTTGTGGTTCATGATGATTTGGATATCTTATTGGGCAAGTATAAAATTCAATTCGGTAAAGGGCCGCGGCAACACAACGGATTGCATTCAATTTATGAACGATTCGGTTCAAAGCAGTTTTGGCATGTGAGAGTAGGGATAGAAAACAGAATCAAGAATTCAAAATACAGAAGACAGAAGATTTCTGGGGAGGAATATGTTTTGCAGCGGTTTCCCGATGAAGAGCGGGTGGTTCTTGAACCGGTCATGAAAAACGTTCTCGATGAGCTTATACTACGTCTTCACAAGAGTCAGGAGTAG
PROTEIN sequence
Length: 169
VGFLGVDLLAERLHCDPWKESRHGKLFFAWSEVDGERVELIKPFTFMNASGVALAYAFQKNQNLRLDNLFVVHDDLDILLGKYKIQFGKGPRQHNGLHSIYERFGSKQFWHVRVGIENRIKNSKYRRQKISGEEYVLQRFPDEERVVLEPVMKNVLDELILRLHKSQE*