ggKbase home page

RifSed_csp2_16ft_2_scaffold_120312_13

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(6059..7219)

Top 3 Functional Annotations

Value Algorithm Source
HAD-superfamily hydrolase, subfamily IIB id=2619049 bin=GWC1_Spirochaetes_27_15 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 398.0
  • Bit_score: 243
  • Evalue 2.50e-61
HAD-superfamily hydrolase similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 389.0
  • Bit_score: 231
  • Evalue 2.20e-58
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 386.0
  • Bit_score: 746
  • Evalue 1.70e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1161
ATGCGGATTGCTTATTTTTCGGACGTATTTCTGCCGAAAGTCGATGGGGTGGTCACCTCGCTGGTGACACTTTCCGCAGAGCTCGGGAAGCGGGGCCATGAAATTACCATTTTTTGTCCCGGTCCCGGCCGTGGGAAACGGATCGTTTGGGGCGCGAAGAATGTTACTGTCTATCCTGTTGCATCGATGCCGACCTTCTATCCTGACTTTCGGCTGGGAACTCCGAGCGGGAGGTTCCTTTTGCGCTTAAGGGAATTGCGAGCGGATGTGATACACCTGCATAGCCCCGGTCCATTGGGATTTGAGGCTTTGGCAGGAGGCAGACTTTTACGCATACCGATTGTCGGGACCTTCCATGCCTATTTGATGGAACCTGAATATTTAAAGATTGTCCGGCTCTCCCGGTTTAAGCGTGTTTCAAAAACGCTTTGGCGATATGTGATCGCTTTTTTTAATCGCTGTGATTATGTCATCGCGCCGACTGCATTTGTCGCAGAAGATCTGCGTGCGCATGGGCTGGTGAAACCTCAACGCGTGGTTTCGAACGGCGTTGATCTTTCGATCATTAACGGCGTGTCAGCTCAAGCAGTTCGTTCCGTCAAGAAACAGTTCGGTTTGGGGGATGCAGTGGTTCTCTACGTTGGCAGGTTGAGTCAGGAAAAAAATTTGACGCTTCTCATTGCGGCATTTGAGCGCGTTGCACGGCAATTCCCTCAAGCGCAACTTTTATTCGTCGGTGACGGATTGATGCGCTCGCGGCTTATGCGATTGGCAAAGAAGCTGCAGATTGAGAATAGAGTTCTTTTTACCGGTCAAATAGAACACCGGCAACTTCTTTCTTCGGGGATCTACCAATCCTCGTTAGTCTTTTGCAGACCAAGTACATCAGAGACGCAAGGGCTCTCCGTTATGGAAGCCGCGGGGGCCCGTTTGCCAATCGTCGGAGCCAATGCTCGGGGTGTGAAGGAACTCGTTGACGGCAATGGAATTCTTGTCGAAGGAGATGATATAAGAGGGTTTAGTGAAGGGATCATGACTTTTTTGGGATCCGAACGGAGGCGGAGGCAAGCCTCAAGACTTTCAAGGAAGATGGCGAGGCGATATTCCATTGATCGGGTTGCAAAAACTATGGAACGCGTCTACGCCTCAGTTATCGAGTAG
PROTEIN sequence
Length: 387
MRIAYFSDVFLPKVDGVVTSLVTLSAELGKRGHEITIFCPGPGRGKRIVWGAKNVTVYPVASMPTFYPDFRLGTPSGRFLLRLRELRADVIHLHSPGPLGFEALAGGRLLRIPIVGTFHAYLMEPEYLKIVRLSRFKRVSKTLWRYVIAFFNRCDYVIAPTAFVAEDLRAHGLVKPQRVVSNGVDLSIINGVSAQAVRSVKKQFGLGDAVVLYVGRLSQEKNLTLLIAAFERVARQFPQAQLLFVGDGLMRSRLMRLAKKLQIENRVLFTGQIEHRQLLSSGIYQSSLVFCRPSTSETQGLSVMEAAGARLPIVGANARGVKELVDGNGILVEGDDIRGFSEGIMTFLGSERRRRQASRLSRKMARRYSIDRVAKTMERVYASVIE*