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RifSed_csp2_16ft_2_scaffold_130655_1

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(80..1456)

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=15191079 bin=GWC1_OP11_49_16_COMPLETE species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 389.0
  • Bit_score: 564
  • Evalue 5.90e-158
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 378.0
  • Bit_score: 458
  • Evalue 2.20e-126
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 458.0
  • Bit_score: 899
  • Evalue 1.40e-258

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1377
ATGAGCAATACCAAGCCAGTGATGGCTGCGGAGAATCCGATTATCCCTCAAGAAACAGCCAAAGAAGTCACCGTTGAGCAAATTGTTGGCGATGGGGTGGACTCTCAATCCACTGTAAGCGAGTCGGCGCCGGTTCCTGTTCCTGATGCCTCAGTTGCGATGCCGCAGACTCCCGGTGGGGTTGGTTTTACGGGGTTTGTTGATGATCGGATTATTCCGGATGCCGGGCTCCCGACGGAGATCGTTTCGGGGATTCTGGATACCCGGCCTGAAGGTCATGGGCTTCTCAGACCTAAGTTTGCGCCAAGTACCGAAGATGTCTATATTTCTTCATCGCAGATCCGCCGATTTGCCTTGCGGCCTGGTGATCTTGTCGAGGGGCCGGCGAGGAGACCAAAAGAGAATGAACGCTACTGGGGACTTTTAAAAGTCGAACAGGTGAATGGGAAAAAAGTCTCCGCGTTAACACGGCGGGTCAACTTTGATCAGCTGATACCCATCTTTCCCAATGAGAAATTGGTTCTTGAGACGGGAAAGGAACCGCTTTCCAACCGGGTCATCGATTTGGTCGCGCCGATCGGCAAAGGACAGCGAGGGTTGATCGTTTCTCCGCCCAAGGCAGGGAAGACGACAATTCTTAAGGATATTGCTGCCGGTGTGGCTGCTAACTATCCTGATGTCCATATCATGGCCGTTTTGATCGGAGAACGCCCGGAAGAGGTGACCGACATCGGACGTCATATTGAAAAAGTGACGAACGGAACGGGAGAAATTGCCTCTTCAAATTTTGATGAACCTGCCGAACAGCAAACTTGGGTTGCGGAAACCGCTTTGGAACGGGCGAAACGTTTGGTGGAAATGGGCAGGGATGTGGTAATTGTCCTCGATTCGATTACCAGGTTGGCGCGCGCCTACAATCTGGCAATTCCGACTTCGGGAAGGACGCTCTCAGGAGGTTTCGACCCGGCGGCCTTGTATCCTCCGAAGCGATTTTTCGGCGCTGCCAGAAATTTTGAACCGTTTGAAACACCGGACGGCAACAAAACCGCATCGATGACCATTTTGGGTACGGCATTGGTTGAAACGGGAAGCCGAATGGATGATCTCATCTATGAGGAATTTAAAGGCACGGGGAACATGGAACTGCATCTTGACCGACACTTGTCCGACCGGCGGATTTTCCCCTCGATTGATGTCCAGCGGTCCGGCACCCGCAAGGAAGAGCTCTTGTTTGATTCCTCTTCCTACCAAAGCATTGTCATCATGCGGCGGATGATCGATGTTCTGAACAAGGATGAGCGTACGGAGCTTCTGATTGATCGTCTGCGGAAGTCGAAAAATAACAAGGAATTTTTAGCTTCACTCAAAGAGGGGTAA
PROTEIN sequence
Length: 459
MSNTKPVMAAENPIIPQETAKEVTVEQIVGDGVDSQSTVSESAPVPVPDASVAMPQTPGGVGFTGFVDDRIIPDAGLPTEIVSGILDTRPEGHGLLRPKFAPSTEDVYISSSQIRRFALRPGDLVEGPARRPKENERYWGLLKVEQVNGKKVSALTRRVNFDQLIPIFPNEKLVLETGKEPLSNRVIDLVAPIGKGQRGLIVSPPKAGKTTILKDIAAGVAANYPDVHIMAVLIGERPEEVTDIGRHIEKVTNGTGEIASSNFDEPAEQQTWVAETALERAKRLVEMGRDVVIVLDSITRLARAYNLAIPTSGRTLSGGFDPAALYPPKRFFGAARNFEPFETPDGNKTASMTILGTALVETGSRMDDLIYEEFKGTGNMELHLDRHLSDRRIFPSIDVQRSGTRKEELLFDSSSYQSIVIMRRMIDVLNKDERTELLIDRLRKSKNNKEFLASLKEG*