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RifSed_csp2_16ft_2_scaffold_140927_4

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: 2072..2311

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, XRE family id=43764 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 78.0
  • Bit_score: 120
  • Evalue 3.90e-25
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 78.0
  • Bit_score: 77
  • Evalue 1.10e-12
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 153
  • Evalue 9.90e-35

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 240
ATGAAGGATCCGGACTATCGACGTGAGTATACAAAACTTGAGCCGGAGTTTCAGATCGCGCGGCAAATCATCGGCGCCCGGATCAAACAGAAGATGACGCAGGAAGAGTTGGCGGAAAAGGTTGGCACCGGCCAGGCTGTCATTTCCCGACTTGAAGGGATGAACGCGAAGCCATCCATTTCACTTCTCCAACGCGTCGCCAGGGCTTTGGAGACGAAGATCAAAGTCACCATTGGTTAG
PROTEIN sequence
Length: 80
MKDPDYRREYTKLEPEFQIARQIIGARIKQKMTQEELAEKVGTGQAVISRLEGMNAKPSISLLQRVARALETKIKVTIG*