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RifSed_csp2_16ft_2_scaffold_203712_6

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: 1871..2170

Top 3 Functional Annotations

Value Algorithm Source
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 101.0
  • Bit_score: 122
  • Evalue 1.30e-25
RNA-binding region RNP-1 similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 105.0
  • Bit_score: 107
  • Evalue 1.60e-21
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 200
  • Evalue 6.80e-49

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCTACCAAACTATATGTTGGAAATCTTGATTATGGCACGACCAGCGATCAACTCGGCCAACATTTCGCGCAAGCAGGAAAGGTTGTTGAGGTCAATGTTATCAGCGACCGATACACCGGCCGATCAAAAGGCTTTGCTTTCGTTGAAATGGCAAGCGAGAAGGAAGCTGCGAAGGCTATCGAGATGTTCAACGAAAAAGATTTCGGCGGAAGGTCAATCGTCGTGAACGAAGCCCGACCCAAGCGCGAGCCGAGTTTCGGCGGAGGCGCAGGCGGAGGCGGCGGACGCGGACGATAA
PROTEIN sequence
Length: 100
MATKLYVGNLDYGTTSDQLGQHFAQAGKVVEVNVISDRYTGRSKGFAFVEMASEKEAAKAIEMFNEKDFGGRSIVVNEARPKREPSFGGGAGGGGGRGR*