ggKbase home page

RifSed_csp2_16ft_2_scaffold_211038_2

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(167..1003)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, PaaX family; K02616 phenylacetic acid degradation operon negative regulatory protein id=66763 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 259.0
  • Bit_score: 148
  • Evalue 6.10e-33
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 278.0
  • Bit_score: 533
  • Evalue 1.20e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 837
ATGCGGCGGAGAGAGCTACGAGAAACCATTGAGGATTTCTCATTTGGAGTGCTATCAACCTCAATCAACCTTGTGTTGAGCTGGGTGGTTTTTTCAGCTGATGTGATGACTGCTGGGCGGAGTCCTGCATCGGTCATGAGGGCTGTTGAGGCGTCCGCCGGATTCAGGGGTGTGAGCCAGGATTCTCTCAAGCAAGCCTTTTGGCGAGCACAGAACAAGGGACTCCTCAGACGAAAACGGGAGCGAGGACAAGAATTTTGGGAAGCAACCGAAGAGGGGAGGAGGCGTCTCGTATCCGAGCTTCCTGTCTATTTAAAACATCGTCCTTGGAACAAAAGACTCTATTTGGTTCTCTACGACATTCCTGAAGAGCAAAAGCGGGGTCGTGAGAGGTTGCGGGAGAAACTTGTCAAGATTGGAGCGGGACGTTTGCAAAACAGCAGCTACCTCATACTCTGGGACCCAACGGAGGTACTCAGAACATTCATCAGGGAACAGGGACTTTCCGGAATGGTCATCGTTTCTGATACCGGTACAAATGGAAGTATCGGCGAAAAGGGCTTGGATGAGCTCGTTCACGAGGTTTATCAGCTCGATGAGTTAAATCGTCGTTATCAAGAATTTATGAAGATGACAAAGTCTAAGGAAACAACGGGAGAGCAACTTGCGTTTATCTACCTTTCCATTCTGAAAGACGATCCGCAGCTACCTTTTGAGCTTCTCGGGCCGACGTGGATGGGTGATCGGGCGTTTGAAACATTTGAGACCGTTCTCGGATCTCAAGCGGATCTCTTTTTATCTAACAAGCGATCGCCGGTCGGAGAAAAAGTACGTTAA
PROTEIN sequence
Length: 279
MRRRELRETIEDFSFGVLSTSINLVLSWVVFSADVMTAGRSPASVMRAVEASAGFRGVSQDSLKQAFWRAQNKGLLRRKRERGQEFWEATEEGRRRLVSELPVYLKHRPWNKRLYLVLYDIPEEQKRGRERLREKLVKIGAGRLQNSSYLILWDPTEVLRTFIREQGLSGMVIVSDTGTNGSIGEKGLDELVHEVYQLDELNRRYQEFMKMTKSKETTGEQLAFIYLSILKDDPQLPFELLGPTWMGDRAFETFETVLGSQADLFLSNKRSPVGEKVR*