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CG08_land_8_20_14_0.20_scaffold_494_c_25

Organism: CG08_land_8_20_14_0_20_Parcubacteria_OD1_48_21_curated

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38
Location: 23483..24043

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWE2_Bacteroidetes_42_42 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 182.0
  • Bit_score: 80
  • Evalue 1.80e-12
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 180.0
  • Bit_score: 78
  • Evalue 1.90e-12
Tax=CG_CPR12_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 377
  • Evalue 5.80e-102

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Taxonomy

CG_CPR12_01 → CG_CPR12 → Bacteria

Sequences

DNA sequence
Length: 561
ATGGCAGACTCCGACTCAACAAAGCTCAATTTGGCAAACTTACTTGCGCAAAGCGCAAAAGGAGACGCACTTTCCTACCGTGGTGTCTTTGATCATTTACACGGACGGATTTTTCGCTACATACTCTCGCGCTGTTCAAATAGGGATGATGCGCACGATATTACCCAAACCGTATTCATAGATCTTTGGCAGGCGTTGCCGAAATTCGTCTATACATCTGATGAGGAATTTTATGGATTCGTATTTCTCATTGCCAAGCGGAAACTTGGCAAACATTATCGTTCCAGAAAGCCGCACGTGGAATTAGATGATCGTTTCATTGCGGATAATTACCACATAAGCACAGAAGATTATCGCCATCTGGAGCACTTACTGAAAAAACTTAGCTCACGTCAGCAGGAAATACTGCGACTTCGGTACTGGAGCGGTTTAGCTTTTAAAGAAATAGCAACAATCCTTAGGATAAGGGAAGGAACCGCAAAAGTTTGGCACCACCGCGCCGTTAAAAAACTGGAGGCTATCGTTCAAGAGAGCGCACTTTACGAAGAGAAGCATATATGA
PROTEIN sequence
Length: 187
MADSDSTKLNLANLLAQSAKGDALSYRGVFDHLHGRIFRYILSRCSNRDDAHDITQTVFIDLWQALPKFVYTSDEEFYGFVFLIAKRKLGKHYRSRKPHVELDDRFIADNYHISTEDYRHLEHLLKKLSSRQQEILRLRYWSGLAFKEIATILRIREGTAKVWHHRAVKKLEAIVQESALYEEKHI*