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CG22_combo_CG10-13_8_21_14_all_scaffold_26772_c_1

Organism: CG22_combo_CG10-13_8_21_14_all_Peregrinibacteria_49_11_curated

near complete RP 46 / 55 MC: 1 BSCG 45 / 51 ASCG 10 / 38
Location: 28..615

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 167.0
  • Bit_score: 106
  • Evalue 2.50e-20
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 163.0
  • Bit_score: 56
  • Evalue 8.20e-06
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 177.0
  • Bit_score: 129
  • Evalue 5.00e-27

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Taxonomy

R_PER_ii_51_35 → PER-ii → Bacteria

Sequences

DNA sequence
Length: 588
ATGGTAGTTCCTCATCCCAAGTGGTGCATTTCAAAGTTCAGCGGGGGTGACGACACTATTCTCCAGCAGATCGATTCCACGTACACGGATCACGCCGATGCCCTCTACCGGTTTTGCTATACGCGTACACTCTGTACTGAGGACGCTCATGATTTGGTGCAGGATTCCTTTATGAATGTTTATGAGTATCTGAAGCAGGGGAATGTCATTCGCAATGCCAAAGTGTTCCTGTTTCAGGTCGCAAACAATCTCATCATCGATCGCGCACGTGCGGAGAAGCGGAGACGAAGCCAGGAAGTCTCTCTTGAATTTCTGGAACATGCAGGGTTGGAGTTGAAAGGTGATGATGAAGTCTTTCGTTCCATTCACCGAAAGATGGAAGCGCACAAAATTATCAGAATTGTCAAATCACGCTGTTCTGCAGAAGATTACAATTTGTTCGTGCTTCGTTACATGACTGGCATGATGCCGGCAGATATTGCAACTATTTCAGGGCTATCCGCGAACTGTGTGTCGGTACGTCTTAGTCGTGTTTTGAAGGAAGTTTCCGCAGAAGCAAGTGACATTCGCAGGGGTGGGACAAGTTAA
PROTEIN sequence
Length: 196
MVVPHPKWCISKFSGGDDTILQQIDSTYTDHADALYRFCYTRTLCTEDAHDLVQDSFMNVYEYLKQGNVIRNAKVFLFQVANNLIIDRARAEKRRRSQEVSLEFLEHAGLELKGDDEVFRSIHRKMEAHKIIRIVKSRCSAEDYNLFVLRYMTGMMPADIATISGLSANCVSVRLSRVLKEVSAEASDIRRGGTS*