ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_4

Organism: CG23_combo_of_CG06-09_8_20_14_all_150_Berkelbacteria_40_13_curated

near complete RP 46 / 55 MC: 5 BSCG 47 / 51 ASCG 12 / 38
Location: comp(1875..2309)

Top 3 Functional Annotations

Value Algorithm Source
smpB; ssrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 138.0
  • Bit_score: 158
  • Evalue 4.00e-36
smpB; ssrA RNA (tmRNA)-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 148.0
  • Bit_score: 152
  • Evalue 4.80e-35
Tax=RBG_13_Berkelbacteria_40_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 138.0
  • Bit_score: 166
  • Evalue 2.70e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Berkelbacteria_40_8_curated → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGAAAATCATCACCACTAATAAAAAAGCTTTTGGCCAATACCAAATTTTAGAAAAGTACGAAGCTGGTATGGTTTTAAATGGACAGGAAATTAAGGCTATCCGCGCCGGCAAAATCAATCTGCAAGGCAGTTTCGTCCGTGTTATGACTGATTTAAAATCAGGCAAGCCGGAAATCTGGGTAGTGAATTTGCATATTAACGCAGGCGATGATCCCAACCGCACGAGAAAACTTTTAATGCATAAAAAAGAAATTTTAAAACTGGCCGGCAAAACTCAAATAAAAGGATTAACTTTAGTTCCATTGCAACTGTATCTCAAAAAAGGCTTTGCCAAATTGGAAATCGGCCTTGGTAAAGGATTAAAAATTTACGATAAAAGAGAACAAATTAAAAAGAAAGAAATTAAAAGAAAATTGCAACGCGGCGAGCTTTAA
PROTEIN sequence
Length: 145
MKIITTNKKAFGQYQILEKYEAGMVLNGQEIKAIRAGKINLQGSFVRVMTDLKSGKPEIWVVNLHINAGDDPNRTRKLLMHKKEILKLAGKTQIKGLTLVPLQLYLKKGFAKLEIGLGKGLKIYDKREQIKKKEIKRKLQRGEL*