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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_11800_c_2

Organism: CG23_combo_of_CG06-09_8_20_14_all_150_Berkelbacteria_40_13_curated

near complete RP 46 / 55 MC: 5 BSCG 47 / 51 ASCG 12 / 38
Location: 2034..3125

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 361.0
  • Bit_score: 507
  • Evalue 6.80e-141
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 359.0
  • Bit_score: 433
  • Evalue 3.50e-119
Tax=RBG_13_OP11_40_7b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 364.0
  • Bit_score: 514
  • Evalue 1.00e-142

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Taxonomy

RBG_13_OP11_40_7b_curated → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1092
ATGCCCTATCAGAAAAAGAAAAATGACAAAGAGCAACTTCAGCTCTCACAACAAGTTGAGGCCTTAATTTTAAAAGGCAAAACTTTTGGTTTTGTCACCGACCGAGAGATTTTACAGACCTTGGGCGAAATAGAAAACGATATTCCTATGGTTGATGTTCTATATGTCCGCTTGTTGGAAGAAGGCATTGATGTTTCAGAATCAAAAAGATTTGTTGATATTGCTTTACTGGGCAAAAAGGCCAAAACGCCAGATTTATCTCTAATTTCTGACGATTCGGTCAGAATGTATTTGCGTGAAATAGGCAAAGTGCCTCTTTTGACCAGAGAAGAAGAAATCAAACTGGCCAGAAGGGTTGCGGCCGGCGATATTTCGGCCAAAAAGAAACTGGCTGAAGCCAACCTAAGGTTGGTTGTCTCTATTGCCAAAAGATATATTGGCCGCGGTTTGTCGCTGTTGGATTTAATACAGGAAGGCAACATTGGTCTTTTGCGAGCCGTGGTAAAATTTGATTTCAGGAAGGGTTTTAAATTTTCTACATACGCCACTTGGTGGATTAGACAGGCCATCACCCGCGCCATTGCCGACCAGTCGCGTACGATTAGAATCCCGGTTCATATGGTTGAGACGATGAACAAGCTGGTTAAAGTGCAAAGGCAATTGGTTCAGGATTTGGGCCGAGAGCCGTTGCCCGAAGAAATAGCCGCCGAGATGAATTTACCGGTTGAAAAAGTTGAGCATATTTTGAAAATCTCCCAAGAAACCATTTCTTTGGAAACGCCTGTCGGCGAGGAAGAGGATTCGCATTTGGGCGATTTTCTGGAAGACAAAGATAGCTTATCGCCCCAAGAAGCGGCTATTTACCAGTTGCTCAAAGGTCACGTTAAGGAGTTTTTGGCTTATTTAATGCCGCGCGAGCAGAAAATCTTGAAAATGCGTTTCGGGCTGGAAGAGGGCCGTACGCATACCCTGGAGGAGGTTGGTAAGGAGTTCGGTGTAACCCGAGAACGTATTCGCCAAATTGAATCCAAGGCCTTGCAAAAACTTCGCAAACACGAGCAAGCCAGCCAGTTGAAAGATTACCTGCAATAA
PROTEIN sequence
Length: 364
MPYQKKKNDKEQLQLSQQVEALILKGKTFGFVTDREILQTLGEIENDIPMVDVLYVRLLEEGIDVSESKRFVDIALLGKKAKTPDLSLISDDSVRMYLREIGKVPLLTREEEIKLARRVAAGDISAKKKLAEANLRLVVSIAKRYIGRGLSLLDLIQEGNIGLLRAVVKFDFRKGFKFSTYATWWIRQAITRAIADQSRTIRIPVHMVETMNKLVKVQRQLVQDLGREPLPEEIAAEMNLPVEKVEHILKISQETISLETPVGEEEDSHLGDFLEDKDSLSPQEAAIYQLLKGHVKEFLAYLMPREQKILKMRFGLEEGRTHTLEEVGKEFGVTRERIRQIESKALQKLRKHEQASQLKDYLQ*