ggKbase home page

CG_4_10_14_0.2_scaffold_404_c_9

Organism: CG_4_10_14_0_2_um_filter_Roizmanbacteria_OP11_36_9_curated

near complete RP 48 / 55 MC: 4 BSCG 45 / 51 ASCG 9 / 38
Location: comp(4752..5453)

Top 3 Functional Annotations

Value Algorithm Source
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 146.0
  • Bit_score: 204
  • Evalue 7.90e-50
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 154.0
  • Bit_score: 156
  • Evalue 5.30e-36
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 157.0
  • Bit_score: 243
  • Evalue 1.60e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_06_38_12 → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCATATAGAAAAAATAATACTAGAGAGGAAAATCCATACGACGAAAGAGTTGTGTTTATTCGTAGAATTTCTAAAAAAACAACTGGAGGCAATTACATAACATTTTCCGCCCTTGTTGTTGTTGGAGATAGAAAAGGAAAAGTTGGAATTGGTTTGGGACGTGGACGAGAGGTTCCCCCTGCTATTCAAAAAGGCATTACTCAAGCAAAACGAAACATGATTCAATTTCCGCTTTATAATGAGACACTTCCACATGAGATAAAAATTAAATATAAGTCATCGAGATTAATTCTCAAACCAGCACCTCCTGGAACTGGACTGAAAGTTGGAGGAGTAGTACGCGCGGTGCTTGATGTCGCTGGAGTAAATAATGCTTCAGGCAAAATTATTGGTACTCGAAATCAAATAACAAACGCTTATGCAATAATGGAAGCGATTAAACAGCTAAAACCACGCATTGTCAAGGAAACTGTAAAAAAAGAGAAAAAAGTTGAAGTTAAAGCGAAAGATGAAAAAGTTAGTAGGAAAATTGTCGATAAAACCGAACCAGTAAAGAAAGATGTCGTTAAAAAGAAAGTTGAAAAAGCAATAAAATCGTCAAAAGATGTTAAAGTAAAAGCCATTTCCAAAAAGACTTCAGTTAAAAAAAACATTAAAGTAAAAGTTGTAAAAAAACCGAAGACCTCTAAAAAGGCATGA
PROTEIN sequence
Length: 234
MAYRKNNTREENPYDERVVFIRRISKKTTGGNYITFSALVVVGDRKGKVGIGLGRGREVPPAIQKGITQAKRNMIQFPLYNETLPHEIKIKYKSSRLILKPAPPGTGLKVGGVVRAVLDVAGVNNASGKIIGTRNQITNAYAIMEAIKQLKPRIVKETVKKEKKVEVKAKDEKVSRKIVDKTEPVKKDVVKKKVEKAIKSSKDVKVKAISKKTSVKKNIKVKVVKKPKTSKKA*