ggKbase home page

GWB1_scaffold_7248_4

Organism: GWB1_OD1_41_5_partial

partial RP 30 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 8 / 38
Location: 1833..2858

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC {ECO:0000313|EMBL:KKS11571.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 341.0
  • Bit_score: 648
  • Evalue 5.60e-183
type II secretion system protein F KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 340.0
  • Bit_score: 223
  • Evalue 8.90e-56
Type IV pilus assembly protein PilC similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 217
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWB1_41_5 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTTTTTTGTAAAAAGATTGTCATTTTTAATTAAAGCCGGCATTCCGATGCGCGAATCTCTTCTGATGATCCGAGAGCAAACCATGAAAGGCGCATACGCTTCGATTCTCGATACCGTGATTGATAATGTTTCCAACGGTCAAAATTTGTCGACCAGTCTGGCTCGATTCAAAAATGCTTTTGGAGATTTTGCTATAAATATCATTGGTTTTGGGGAGGAGTCGGGAATGTTGTCAGAAAATTTAGAATATATTTCAGATGAACTCGCGAAAAAACAAGCTTTACGGCAAAAAATAATCAGCGCCTCCATCTACCCTATTCTAGTCACGATCGCCACCATAACAATCGTGACTTTTTTGATGGTCTATCTATTTCCGAAAATTTTGCCAATATTTAGCAGTCTCAAATACAGCTTGCCTTTTTCTACCCGAGTGGCTATAGGGATCCGCAATTTTATAAGCAACTTTGGCCTCATCACGTTGGGAGCACTGGTTGTCATGGTCATAGCTTTCTTGATTGCTCTCAAAAAGAGCCAGATGTTTCATTTTTATTTTGATCAATTTATTTTAAAGATACCCATCATCGGAAAAATAATTCAAGATTACAATATCGCCAATTTCACGCGCACTTTTGGGTTGCTGCTAAGAAGCGGCATCACTATCGGCGAGGCTTTGCTTATCTCCGCGAAGACGACCTCAAACCTGGTTTATAAAAAAGAGTTCAAACTGCTTTCTCATGTGGCGAATCGAGGAGAAAAAATATCTGCCCATTTGGTCAAACGAAGCAAACTTTTTCCGGATATCGTAACGCAAATAATTTCGGTCGGAGAGCACAGCGGAAATTTATCGGATTCGCTTATTTATCTTTCCGAAATGTACGAAGCCGAAATATATGATTTCACCAAAAATCTTTCGAGCATGGTAGAACCAATCCTTATGATTATTATGGGAGTCTTGGTCGGATTTATCGCAATTTCCATTATTACGCCGATCTATGGCATCACCCAACATTTGAATGCGAAATAA
PROTEIN sequence
Length: 342
MFFVKRLSFLIKAGIPMRESLLMIREQTMKGAYASILDTVIDNVSNGQNLSTSLARFKNAFGDFAINIIGFGEESGMLSENLEYISDELAKKQALRQKIISASIYPILVTIATITIVTFLMVYLFPKILPIFSSLKYSLPFSTRVAIGIRNFISNFGLITLGALVVMVIAFLIALKKSQMFHFYFDQFILKIPIIGKIIQDYNIANFTRTFGLLLRSGITIGEALLISAKTTSNLVYKKEFKLLSHVANRGEKISAHLVKRSKLFPDIVTQIISVGEHSGNLSDSLIYLSEMYEAEIYDFTKNLSSMVEPILMIIMGVLVGFIAISIITPIYGITQHLNAK*