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rifoxya1_full_scaffold_3834_6

Organism: RIFOXYA1_FULL_Pacearchaeota_34_166

partial RP 34 / 55 MC: 2 BSCG 18 / 51 MC: 1 ASCG 28 / 38 MC: 4
Location: comp(4784..7270)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;" UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 830.0
  • Bit_score: 1350
  • Evalue 0.0
DNA-directed RNA polymerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SIG8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 836.0
  • Bit_score: 787
  • Evalue 1.30e-224
rpoB; DNA-directed RNA polymerase subunit B RpoB similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 836.0
  • Bit_score: 787
  • Evalue 3.70e-225

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Taxonomy

archaeon GW2011_AR13 → Archaea

Sequences

DNA sequence
Length: 2487
ATGATGTATATTGCGGAAAAAGCAAATCTTCAAGGAACTAAAAAAGAAATTCTTGACCGAGTTAAACAAAGAATTGATTCTTATTTGTTTCCGCACATTGGTGTAAAAAAAGAAGACCGTGTGAAAAAAGCCGTTACAATTTGTAAGTTGATTAAACAATTTATCGTTGCTAAAGATAACCCTCATTTAAGAACTGATAAAGACCATTACTCAAATAAGCGAGTTAGACTTTCTGGTGATTTGCTTTCTACTTTGTTTAGAATTAATTTGGGAATTTTGGTTCGAGACATTCAATATTCTTTACAGAAATCTTCGAAGAGAAAGAAATTTTATTCGATAAAAACAATTGCTAAATCGACTTTGTTTTCTCATAGAGTTGAATCTGCTATCGCGACTGGTAGTTGGACTGGTGAAAGATCGGGTGTTACTCAGAATATGCAGAAGACAAATTATCTTGATACAATTTCTCAATTGCAGAGAGTTTCGTCGATGTTAGCGTCGGATCAAGAGAATTTTATGGCGAGAACTTTGCATCCAACTCACTACGGAAGATTCTGTCCAATTGAAACTCCAGAGGGAACTGAAATTGGTCTTAGAAAAAATCTTGCTATTTTATGTAAAATTTCAAACAAAATAAATTTTGACGAGAAGAAATTTATTCAAGAATTAGATGGGCTTGATAAAGAAGGAATTGAAGGTTCAGATGTTTTCTTAAATGGTATTTTTATTGGAAGTGTTAAATCGCCTGAAGAATTTGTTAAGAATATTAGAGAGAAAAGAAGAGAAGGTAGGCTTCCTCGACAAATGAGTGTGAGATACGATTCTGATTTTGATAATCTTTTGCTTTCTACAGAACCAGGTAGAGCGTTGAGACCGGTTATAATTGCCGACGATGGAGTTTCAAGATTAAAGAATGAACATTTACTTCAACTTGAACAGAATGAAATGAAATGGGAAGATTTAATTGAGAAAAAAGTTATTGAATATATTGATGCTTCGGAAGAAGAGAATGCTTTGGTTGCCTTGTACGAAGATGAATTAACTCAAGATCACACGCATTTGGAAATTGACGCGATGGATTTGTTGGGTGTTGTTACAAGTTTAGTTCCTTACGGAAATCATGATCAGAGTTCGAGATTGAACAGAGGTTCGAAGACGCAGAAGCAGGCACTTGGTTTGTACGCGGCAAATTATCCTTGTCGTCTTGATACAGATGTTTCTATTTTACAATATCCTCAGAAACCAGTTGTGAGAAGTTTTGTTTATGACACTTTGCAAACTTATCCTGCGGGTCAGAATTTAACCGTCGCTATTATGTCTTATGAAGGTTACAACATGGAGGACGCTTTAGTTTTTAACAAAGGTTGTCTTGACCGAGGAGTTGGAAGAAGTTTTTATTTCAGACCTTATTCTGCTGTTGAAATGAATTATGCTGGTGGACTTAAGGACGAAATAGTTGTTCCAGATAAAGATACTTCTGGTTATAGAACTGAATCGAGTTATCAGCATTTGGAGGATGATGGAATAATTTATCCTGAGGCAGAAGTTAAAGAAGGACAAGTTTTGATTGGTAAGACTTCTCCGCCTAAATTTTTATCTGAGGCTCGGGAAATTTCTGTTCGTTCAAAGAAAGAATCAAGCGTTACACTTCGACAAGAAGAAACTGGAACTATCGACGCAGTTTTTGTTACAGAAGATAACGAAGGAAATAAAATTGTTCAGATTAAAACTCGTGACCAGAGAATTCCAGAATTGGGAGATAAGTTTGCAACTGCGCATGGTCAGAAGGGTGTTATTGGGATGATTGTTCCAGAGAATGATGTTCCATTTACTGCGAGTGGAGTTAAACCAAATGTTATTTTCAATCCGCATGGTTTGCCGAGTCGTATGACTGTGGGTTATTTGTTAGAATTACTTGCGGGTAAAGTTGCTTGTTTAAGAGGGGAAGTTGTCGACGGGACTCCTTTCTCGGGTGAAAATAAACGGGAATTGGAAGACCAGTTGAAGAGCTTAGGATTTAGATATGATGGAAAGGAAACTATGTTTAATGGAATTACTGGTAAGAGAATGGATGTTAAAATTTTTATTGGTAATTTGTATTATTTGAAATTGAAACACATGGTCGGAAATAAGATTCATGGAAGAGCTTCTGGAAAGGTTGCACTTTTGACTCGACAGCCTGTTGAAGGTCGGTCTCGTGGTGGTGCTTTGAGATTAGGAGAAATGGAACAGCAAGCTTTGGTTGCTCATGGAGCTTCATTATTATTGAAAGAAAGATATGATTCAGATAAAGTTGTTTTGCCAATCTGTAAAAATTGTGGAACAATTGCCGTCGAGGATACTATAAGAAATAAAACTTATTGTCCAATTTGTAACAGTGAAGAAGTTGAACCTGTTGAAGTTTCGTACGCTTTCAAATTATTGCTGGAAGAATTACAAGGATTACATATTAAAACTAAACTTGAGTTAAAAAATAAATACGAATAA
PROTEIN sequence
Length: 829
MMYIAEKANLQGTKKEILDRVKQRIDSYLFPHIGVKKEDRVKKAVTICKLIKQFIVAKDNPHLRTDKDHYSNKRVRLSGDLLSTLFRINLGILVRDIQYSLQKSSKRKKFYSIKTIAKSTLFSHRVESAIATGSWTGERSGVTQNMQKTNYLDTISQLQRVSSMLASDQENFMARTLHPTHYGRFCPIETPEGTEIGLRKNLAILCKISNKINFDEKKFIQELDGLDKEGIEGSDVFLNGIFIGSVKSPEEFVKNIREKRREGRLPRQMSVRYDSDFDNLLLSTEPGRALRPVIIADDGVSRLKNEHLLQLEQNEMKWEDLIEKKVIEYIDASEEENALVALYEDELTQDHTHLEIDAMDLLGVVTSLVPYGNHDQSSRLNRGSKTQKQALGLYAANYPCRLDTDVSILQYPQKPVVRSFVYDTLQTYPAGQNLTVAIMSYEGYNMEDALVFNKGCLDRGVGRSFYFRPYSAVEMNYAGGLKDEIVVPDKDTSGYRTESSYQHLEDDGIIYPEAEVKEGQVLIGKTSPPKFLSEAREISVRSKKESSVTLRQEETGTIDAVFVTEDNEGNKIVQIKTRDQRIPELGDKFATAHGQKGVIGMIVPENDVPFTASGVKPNVIFNPHGLPSRMTVGYLLELLAGKVACLRGEVVDGTPFSGENKRELEDQLKSLGFRYDGKETMFNGITGKRMDVKIFIGNLYYLKLKHMVGNKIHGRASGKVALLTRQPVEGRSRGGALRLGEMEQQALVAHGASLLLKERYDSDKVVLPICKNCGTIAVEDTIRNKTYCPICNSEEVEPVEVSYAFKLLLEELQGLHIKTKLELKNKYE*