ggKbase | organisms

Consensus taxonomy: Bacteria

Taxonomy override: Parcubacteria

Metagenomic Context

Parent: BJP_IG2599_UNK

Properties

Avg. coverage: 151.14 Longest contig: 57.00 Kbp Bin length: 1.44 Mbp GC content: 37.45 %

Contigs count: 211 Features count: 1633 rRNAs count: 3 tRNAs count: 50

Genome completeness

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1

Displaying items 51-100 of 211 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig2599_scaffold_40517 Species: CG_Wolfe_01 (50%)	2	1525 bp	43.74	51.64	97.97
bjp_ig2599_scaffold_53461 Species: R_Bacteroidetes_44_7 (50%)	2	1227 bp	42.38	37.78	100.49
bjp_ig2599_scaffold_68447 Species: CG_Desulfob_01 (50%)	2	1007 bp	37.44	70.16	75.07
bjp_ig2599_scaffold_65266 Species: Leptospira interrogans (50%)	2	1046 bp	42.64	71.27	94.93
bjp_ig2599_scaffold_44178 Species: CG_Deferri_01 (50%)	2	1425 bp	43.58	58.32	82.32
bjp_ig2599_scaffold_25643 Species: RLO_RIF_OD1_13_41_11 (50%)	2	2167 bp	37.38	149.17	81.82
bjp_ig2599_scaffold_29335	2	1953 bp	43.16	162.52	13.06
bjp_ig2599_scaffold_48849 Species: Thermovirga lienii (50%)	2	1316 bp	39.36	111.13	79.10
bjp_ig2599_scaffold_41756 Species: R_OD1_Wolfebacteria_41_13b (50%)	2	2559 bp	38.02	171.69	76.20
bjp_ig2599_scaffold_29865 Species: CG_Delta_04 (50%)	2	1926 bp	31.31	106.00	78.82
bjp_ig2599_scaffold_64125 Species: CG_Elusi_02 (50%)	2	1061 bp	36.95	56.55	77.76
bjp_ig2599_scaffold_80521 Species: Sulfurimonas sp. AST-10 (50%)	2	1539 bp	45.55	47.95	80.12
bjp_ig2599_scaffold_60455 Species: R_OD1_48_18 (100%)	2	1112 bp	34.89	161.33	44.51
bjp_ig2599_scaffold_65590 Species: CG_CP01_01 (50%)	2	1043 bp	36.05	57.09	61.27
bjp_ig2599_scaffold_22234 Species: RBG_13_Euryarchaeota_57_23_curated (50%)	2	2423 bp	36.77	119.73	99.55
bjp_ig2599_scaffold_40859 Species: Parcubacteria bacterium GW2011_GWA2_42_35 (50%)	2	1515 bp	35.78	158.12	72.08
bjp_ig2599_scaffold_28853 Species: RBG_16_Deltaproteobacteria_49_23_curated (50%)	2	1977 bp	36.98	195.90	74.66
bjp_ig2599_scaffold_62061 Species: R_RIF_OP11_01_43_15b (50%)	2	1089 bp	43.71	138.57	67.40
bjp_ig2599_scaffold_105345 Species: mine drainage metagenome (50%)	2	1193 bp	35.46	209.22	95.81
bjp_ig2599_scaffold_51989	2	1253 bp	38.87	44.89	100.08
bjp_ig2599_scaffold_30505 Species: marine sediment metagenome (50%)	2	1897 bp	34.32	26.73	89.67
bjp_ig2599_scaffold_29432 Species: RLO_Nitrospinae_39_15 (50%)	2	1948 bp	42.97	42.89	89.32
bjp_ig2599_scaffold_35729 Species: RBG_13_RIF_OD1_07_42_11_curated (50%)	2	2459 bp	39.85	158.17	89.06
bjp_ig2599_scaffold_30515 Species: Geminocystis sp. NIES-3709 (50%)	2	1896 bp	38.71	44.38	86.87
bjp_ig2599_scaffold_41331 Species: CG_CP01_01 (50%)	2	1502 bp	31.42	6.69	90.08
bjp_ig2599_scaffold_41598 Species: Parcubacteria bacterium GW2011_GWA2_46_9 (50%)	2	2386 bp	38.73	128.25	70.16
bjp_ig2599_scaffold_49178 Species: Megasphaera sp. BV3C16-1 (50%)	2	1309 bp	44.00	92.48	87.78
bjp_ig2599_scaffold_11561 Species: CG_CPR10_01 (50%)	2	4037 bp	37.43	173.33	87.84
bjp_ig2599_scaffold_35509 Species: GWC2_OP9X_49_35_curated (50%)	2	1687 bp	44.99	81.18	96.21
bjp_ig2599_scaffold_53108 Species: CG_CP01_01 (100%)	2	1940 bp	47.63	192.91	96.34
bjp_ig2599_scaffold_24632 Species: Parcubacteria bacterium GW2011_GWC1_44_10 (50%)	2	2236 bp	41.68	165.50	96.47
bjp_ig2599_scaffold_95968 Species: RIFOXYB2_FULL_Elusimicrobia_49_7_curated (50%)	2	2719 bp	40.57	43.64	30.23
bjp_ig2599_scaffold_48725 Species: R_WOR_2_67_20 (50%)	2	1319 bp	65.13	98.94	93.71
bjp_ig2599_scaffold_47780 Species: CG_CP01_01 (50%)	2	1340 bp	43.13	89.89	94.48
bjp_ig2599_scaffold_67087 Species: CG_Delta_04 (50%)	2	1024 bp	43.26	125.39	90.53
bjp_ig2599_scaffold_26399 Species: RIFOXYB2_FULL_Elusimicrobia_48_7_curated (50%)	2	2118 bp	45.14	114.45	98.16
bjp_ig2599_scaffold_64772 Species: RBG_16_RIF03_38_10_curated (50%)	2	1052 bp	41.54	78.85	100.38
bjp_ig2599_scaffold_36401 Species: RBG_13_RIF_OD1_07_37_56_curated (50%)	2	3712 bp	44.37	108.66	100.78
bjp_ig2599_scaffold_52989 Species: Bacteroidales bacterium CF (50%)	2	1235 bp	44.05	9.60	98.87
bjp_ig2599_scaffold_40489 Species: RLO_RIF03_38_15 (100%)	2	1526 bp	36.96	100.56	99.87
bjp_ig2599_scaffold_40745 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1518 bp	33.66	131.52	88.74
bjp_ig2599_scaffold_43045	3	1454 bp	40.65	12.79	98.01
bjp_ig2599_scaffold_59895	3	1121 bp	31.94	148.53	85.64
bjp_ig2599_scaffold_61867	3	1092 bp	42.31	67.72	67.03
bjp_ig2599_scaffold_42672 Species: CG_CP01_01 (66.67%)	3	1464 bp	39.28	90.06	84.43
bjp_ig2599_scaffold_92031 Phylum: Parcubacteria (66.67%)	3	1816 bp	33.04	143.64	88.55
bjp_ig2599_scaffold_27161	3	2070 bp	33.96	157.54	91.16
bjp_ig2599_scaffold_46224 Domain: Bacteria (66.67%)	3	1375 bp	40.51	203.35	100.36
bjp_ig2599_scaffold_23281 Domain: Bacteria (66.67%)	3	2336 bp	39.08	95.03	97.22
bjp_ig2599_scaffold_50066 Order: Clostridiales (66.67%)	3	1291 bp	38.81	27.65	92.25

Displaying items 51-100 of 211 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (BJP_IG2599_Parcubacteria-related_37_151) and add all its contigs / scaffolds to the organism you choose below

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Other organism

BJP_IG2599_Parcubacteria-related_37_151

BJP_IG2599_Bacteria_37_151

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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