ggKbase home page

Ig5770_scaffold_2340_1

Organism: Ig5770_Miz_z4_200_2015_Parcubacteria_38_85

near complete RP 39 / 55 BSCG 46 / 51 MC: 2 ASCG 11 / 38
Location: 1..3075

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' n=1 Tax=uncultured bacterium RepID=K2EAU1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 999.99
  • Bit_score: 1211
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 999.99
  • Bit_score: 1059
  • Evalue 0.0
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 999.99
  • Bit_score: 1238
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3075
AGAGATTTGGCAAAGGCGGAAATGAAAAGCATTGTTCCGATGAAAGTAATCTCCGAAATTGAATACCGGAATTTGTCGCTGAAATTCGGTTCTGTGTTTAAGGCCGGCACCGGAGCGGAAACAGTGAGGGAAATGCTTGCCCGCGCTGATTTAAAAAAGCTTAAAGATACTTTGACTGAAGAATTAAAAAGCGTCAGCAACGATGTCGTAAGGAAAAAAATTACCAAGCGCTTAAGATTGGCGCAAGGAATGATAAAAGCCGGGGTAAAGCCGCAATGGATGTGTTTCACGGTTTTACCCGTGATTCCGCCAGACTTAAGGCCGATGGTCCAGCTGGACGGCGGGCGCTTTGCCACTTCCGATTTGAATGATCTGTACCGAAGAGTTATCAATCGCAATAATCGCCTTAAGCATTTGATTGAATTAAAAGCCCCGGAAGTTATTTGCCGGAATGAAAAAAGAATGTTGCAGGAAGCGCTCGACGCCTTGATCGATAATAGCATCAAGCGCGGGCAAGTAACTATCGCTTCTACCGGCCAGAAAAGGCAGCTGAGATCTTTGGCTGATATGTTAAAAGGAAAGCAAGGGCGATTCAGGCAGAATTTGCTCGGCAAGCGCGTGGATTATTCCGGACGCTCCGTAATCGTGGTCGGACCGGAATTGAAATTGAATCAATGCGGATTGCCGAAAAATATGGCTTTGGAATTGTTCAAGCCATTCGTTATGCGAAAATTAATTGAAGGAAACTATGCCTATAATGTAAGGAGCGCCGCTCGCTTGATTGAGCAGGAGACTGTGGAAGTTTGGGATATTTTGGAAAATATTATTAATGGCAAGGTAGTGCTTTTAAACCGCGCTCCGACTCTTCACCGTTTGAGCATTCAGGCATTTTATCCCGTACTGATTGAAGGCAAGGCTATTCAGATTCATCCTTTGGTTTGCAAGGCTTTCAATGCTGACTTCGATGGAGACCAGATGGCGGTCCACTTGCCGCTAGGCGAAGAAGCGCAAAGAGAGGGCAGAGAGATAATGCTTTCAAGCAAGAATTTATTGAAGCCGGCAACCGGAGATCCGATCGTCATTCCTTATCAGGATATTATTTTGGGCTGCTATTATATGACCAAGATTATTTCCGGCGGCAAAGGCGAAGGCAAGGTTTTCTATGATGCCAAGGAAGCAATTTTGAATTATCAATTAAATATTATCGATCTTAAGGCGGAAATAAAATTGCGCAAAGATTTTGATATTAATGTCATTAAAAAAGAAGAAGCCAACAGCGGGTTATATATTAAGACTTCGGCGGGAAGAATTATTTTCAATGAAGCTTTGCCAAAATCCTTGCGGTTTGTGAACGAAGTTATGGATGCCAAGAACTTAAAAGCTCTAGTGGCTGATTCGCTGGAAAAAGCCGGCGCTGATGAAACGGTAGACTTAGTCGATAGGATTAAAAAATTGGGATTTGAATATGTGACTATTTCCGGCTTGAGCTGGGGAATGAGCGATTTGAAGATACCGGCAGAAAAAGCCGCTTTAATAGAAGAAGCGAAAAAGCAAGCGGAAATTATTGAGCATCAGTATAATGAAGGTTTGCTTACCAGCGATGAACGGAGAACTAAAATAATCGAAACATGGACTGAAACCAAAAATAAAGTTACTAAAGCTGTTTTAAACACTTTGGATCCGAATAGTCCTGTTTTTTTAATGATAGAATCCGGCGCAAGAAGTTCGTGGGCGGTTGTCGCGCAGATGATGGGAATGAAAGGGCTGGTTGTCAATCCGGCCGGAGAAACGATCGAGTTGCCGATTAAAAATAGTTTTAAGGAAGGTTTTGATGTTTTGGAATATTTCATTTCCACTCACGGAGCCAGAAAAGGCATGACTGATATTGCTCTTAGAACCGCTACCGCCGGTTATTTGACCAGGCGCTTGGTGGATGTCGCGCAAGATATGGTTATTAACGAAATTGATTGCGGAAGCAAGCAAAGCATTATTATTCCAAGGATTGACCAATATGAATTAGGCAGAGGCTTTGCGGCGAGAATTTACGGCCGAGCTGCCGCGGAAGACATTATTGATCCAAAAACAAAGAAGGTTTTAGCGCCGGCAGGCGAATTTATTCCGAAAGATATTGCCAAGGTGATTGAAAATATCCCAGGGATTGATTCAGTTAAAGTTCGCACAGTTATTTACTGCAAGGCCGAACGGGGAATTTGCCAAAAATGCTATGGTTACGATTTGGGCAGGAATAAGCCCATTGCTAAAGGCGAAGCTATCGGTATTGTCACCGCGCAAGCTATCGGCGAGCCCGGAACTCAGCTGACCATGAAGACTTTCCATAGCGGAGGAGTCGCTGGACGGGATATCACCCAGGGCTTGCCTCGCGTGGAAGAAATTTTCGAGGCTCGCGTTCCAAAAGGAAAAGCCTTGATTTCCGAAGTGGAGGGAAAAGTTATCGATGTTGTCGTTTTGACCAACAAAAAAATCATCCGCATTAATATTACGGATGAAAAAGGAAAAGCGGAAGCCGAAGTGAAAGAATACGAAGTAGATTCCGATATCGCGATTTCTGTCGAGAAAGGCGCGACTATCAAGAAAGGACAAAGATTGACCGAAGGGCACATTGATATCCATGAACTTTTTAAGCTGGTTGATAAAATGGCGGTGGTAGAATATATTATCGGCGAAGTGCAGGAAATTTACACCGCTCAAGGAGAAGGCATCAATGATAAGCATATTGAATTGATTGTCAGGCAGATGTTCTCGAGAATTATAATCAGCGATGCCGGAGATACCGAATTGCCAGAAGGCAGCGTGGTGGAAGGGGTTCAATACAATAGGGTAAATGCCATGGCCAAGAAAGAAGGCAAGAAGCCGGCCAAAGGCGAAGAATTGCTGCTTGGCATTACTAAAGTATCACTTTCCACCGAAAGCTTCCTGGCTGCCGCTTCGTTCCAGGAAACCGCCCGCGTGCTTATTTCCGCCGCTTTATTCGGCAAGTCCGATGAATTGAAAGGCCTGAAAGAAAATGTCATTATTGGCAAGCTGATACCGGCCGGAACAGGATTTGAAAAATAA
PROTEIN sequence
Length: 1025
RDLAKAEMKSIVPMKVISEIEYRNLSLKFGSVFKAGTGAETVREMLARADLKKLKDTLTEELKSVSNDVVRKKITKRLRLAQGMIKAGVKPQWMCFTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKHLIELKAPEVICRNEKRMLQEALDALIDNSIKRGQVTIASTGQKRQLRSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLNQCGLPKNMALELFKPFVMRKLIEGNYAYNVRSAARLIEQETVEVWDILENIINGKVVLLNRAPTLHRLSIQAFYPVLIEGKAIQIHPLVCKAFNADFDGDQMAVHLPLGEEAQREGREIMLSSKNLLKPATGDPIVIPYQDIILGCYYMTKIISGGKGEGKVFYDAKEAILNYQLNIIDLKAEIKLRKDFDINVIKKEEANSGLYIKTSAGRIIFNEALPKSLRFVNEVMDAKNLKALVADSLEKAGADETVDLVDRIKKLGFEYVTISGLSWGMSDLKIPAEKAALIEEAKKQAEIIEHQYNEGLLTSDERRTKIIETWTETKNKVTKAVLNTLDPNSPVFLMIESGARSSWAVVAQMMGMKGLVVNPAGETIELPIKNSFKEGFDVLEYFISTHGARKGMTDIALRTATAGYLTRRLVDVAQDMVINEIDCGSKQSIIIPRIDQYELGRGFAARIYGRAAAEDIIDPKTKKVLAPAGEFIPKDIAKVIENIPGIDSVKVRTVIYCKAERGICQKCYGYDLGRNKPIAKGEAIGIVTAQAIGEPGTQLTMKTFHSGGVAGRDITQGLPRVEEIFEARVPKGKALISEVEGKVIDVVVLTNKKIIRINITDEKGKAEAEVKEYEVDSDIAISVEKGATIKKGQRLTEGHIDIHELFKLVDKMAVVEYIIGEVQEIYTAQGEGINDKHIELIVRQMFSRIIISDAGDTELPEGSVVEGVQYNRVNAMAKKEGKKPAKGEELLLGITKVSLSTESFLAAASFQETARVLISAALFGKSDELKGLKENVIIGKLIPAGTGFEK*