ggKbase home page

ar4r2_scaffold_567_24

Organism: ALUMROCK_MS4_BD1-5_24_33_curated

partial RP 47 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 4 / 38 MC: 2
Location: comp(30176..30760)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 195.0
  • Bit_score: 168
  • Evalue 5.60e-39
3-isopropylmalate dehydratase small subunit n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L1B2_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 195.0
  • Bit_score: 168
  • Evalue 4.00e-39
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 195.0
  • Bit_score: 168
  • Evalue 1.10e-39

Lists

This feature is not on any list.

Notes

4.2.1.33 Valine, Leucine, Isoleucine biosyn Jill Banfield (11/8/16)

Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAGCAGTGAAACAAATACCCTTGGGGTGAAAAAATTTATAAAAGTAGAATCTGAAGCAATTATTTTGCCATACAAAGATATTGATACAGATATGATAATTCCAGCAGAATATTTAAAAACAACAACTAAAGAAGGTCTTTGAAAATATGCTTTTATAAATATGAAAAAAGCATATTCTGATTTTCCTGAGTTTTGAGATAAAAAAATTATTGTTGCCTGAAAAAATTTTTGATGCTGAAGTTCAAGAGAGCATGCTCCTTGGGCATTGTTAGATACTGGAATAAAAGTAATTATTTCCTCTGAATTTGCCGATATTTTCAGATGAAATTCAGAAAAAAATTGACTTCTTTTAGTTCAGTTAAAAGAATATGAAATACAAGAAATTATGGAAACTAAATGAATTTTGAAAATTGATTTAGAAAATCAAACTGTAGAGACAAAAGATTTTTTGTCTCTACAGCAATGAAAAATTTATCATTTTGAAATAAATAATTTTTTGAAGCAAAAGTTAATAAATTGACTTGATGATTTGGATTATATTTTGCAATTTAGAAAAGAAATTGAAGATTTTGCAAATAAATAA
PROTEIN sequence
Length: 195
MSSETNTLGVKKFIKVESEAIILPYKDIDTDMIIPAEYLKTTTKEGLGKYAFINMKKAYSDFPEFGDKKIIVAGKNFGCGSSREHAPWALLDTGIKVIISSEFADIFRGNSEKNGLLLVQLKEYEIQEIMETKGILKIDLENQTVETKDFLSLQQGKIYHFEINNFLKQKLINGLDDLDYILQFRKEIEDFANK*