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gwa2_scaffold_2305_17

Organism: GWA2_OP11_39_19

near complete RP 41 / 55 BSCG 45 / 51 MC: 1 ASCG 8 / 38
Location: comp(17044..17577)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 355
  • Evalue 3.90e-95
RNA polymerase sigma subunit KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 171.0
  • Bit_score: 107
  • Evalue 3.70e-21
ECF sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 105
  • Evalue 1.00e+00

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Taxonomy

R_RIF_OP11_01_40_20 → RIF-OP11-1 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 534
GTGGAAAAAGGCGATTCTGAACTAGTTCAAGATACATTAAGGGGAGTACTTTCGTCATACGAAGTACTTGTGCGCCGCTATGAAAAATTAATATACTCGCACTCCTTGCGAATTTTGAAACGTGCTCCCGCAGCAGAAGACGCGACACAAGAGGTTTTTCTTCGTGCTTTCCAAAAACTAATAACGTTTGACTCCCATCGCCCCTTTAAACCATGGCTTTACCAGATTGCTACCAACTATTGCCTTGACTATATCCGTAAAAACGCCCGCTTAACAAAACTTGAAAATACGTTTCCGGACAACCATCCTTCGTTAATTGAAAAACTAGCAAAAAGTGACGAAATTAAAAGATTGAGATCCGCCTTAAACAAGTTGCCAAGAATTTACTTTCAGCCAGTTTGGGGATATTATTTCTTAGAACTTGATTACCAACGCCTTGCAAAATCTTTAAATATTCCAGTTAACACCTTAAGAACTAGACTAAAAAGAGGCAAAGCAAGTCTATACAAAATGATGGTTGAATATGAAGTCTGA
PROTEIN sequence
Length: 178
VEKGDSELVQDTLRGVLSSYEVLVRRYEKLIYSHSLRILKRAPAAEDATQEVFLRAFQKLITFDSHRPFKPWLYQIATNYCLDYIRKNARLTKLENTFPDNHPSLIEKLAKSDEIKRLRSALNKLPRIYFQPVWGYYFLELDYQRLAKSLNIPVNTLRTRLKRGKASLYKMMVEYEV*