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gwa2_scaffold_10687_17

Organism: GWA2_OD1_44_13

near complete RP 40 / 55 MC: 2 BSCG 43 / 51 MC: 4 ASCG 10 / 38
Location: 11414..12028

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 404
  • Evalue 6.40e-110
RNA polymerase sigma factor RpoE KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 197.0
  • Bit_score: 101
  • Evalue 4.00e-19
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 104
  • Evalue 4.00e+00

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Taxonomy

RLO_OD1_Giovannonibacteria_44_32 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGAGGAGGAAGGTTCATGAATTTCTCACGCTGGGGAACGACGACTCGAAGGAGATGCCTGATGAGATAATTTTAAAAAAGTCGGTGAACAATCCGGCGCTTTTTTCATTGCTCGTTGATAAATACCAGACTCCGTTTTTCAGAAAAGCGCTCGGTATCGTCCATTCATCGGAAGAGGCCGAGGACATTGTTCAGGAAACATTTACCAAGATCTACGCGAATGCCAAAAAATTCAAAAAACAGCCCGGCGTTGAGTTCAAAAGCTGGGCCTGGCGGATTTTGGTAAATACCTCGCTTACGCATTACCGCAAAGTAAAGAAAACTTTCGGGGACGTGGGATATCTTGATGAGATTTTAGCGGGGGACGATGACGATATCGAATCGAAATTAAAACTTGTTACGGAAAACTCCATAGATAAGGACGACAGAGTCGGCGTTATAAAAGACGCCATGGAAACTTTGCCAACGGAGGCTTCAGCGCTCCTTAAGGCGCATTATGTAGAAGACCGGCCGTATGACGAAATAGCCAAAAAACACGGCCTTTCAATAGGTGCTTTGAAGATGAAACTTTTTAGGGCACGCAAGGTTTTAAAGGATATAGTCAGTGAAGCTTAA
PROTEIN sequence
Length: 205
MRRKVHEFLTLGNDDSKEMPDEIILKKSVNNPALFSLLVDKYQTPFFRKALGIVHSSEEAEDIVQETFTKIYANAKKFKKQPGVEFKSWAWRILVNTSLTHYRKVKKTFGDVGYLDEILAGDDDDIESKLKLVTENSIDKDDRVGVIKDAMETLPTEASALLKAHYVEDRPYDEIAKKHGLSIGALKMKLFRARKVLKDIVSEA*