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gwa2_scaffold_53294_2

Organism: GWA2_OD1_47_7

near complete RP 37 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1462..1998)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU77360.1}; TaxID=1618846 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_7.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 352
  • Evalue 2.50e-94
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 175.0
  • Bit_score: 90
  • Evalue 6.10e-16
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 89
  • Evalue 7.00e+00

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Taxonomy

GWA2_OD1_47_7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAAGTCCCGCGAAGAGAAAGCGTTTATTGAAGCGTTCGAGGCGCATGCGGACGCTCTGTTTCGGCATGCGTTTTTCCGGGTGAGCGACCGCGAAAAGGCCTACGACCTCACGCAGGACACCTACCTCAAGGCCTGGGATTACATCGTGCAAGGCGGAGAAGTGAAGCACTACAAAAGCTTCTTGTACCGCATATTGCACAATCTCATCATCGACTCCTACCGAAAAAAATCCTCGCGCTCACTCGACGAACTTCTCGAGAACGAGGCGACAGCCGCTACGACGGAAGGGCTTCTTTCCGAAGGAAGCGTGCGCGAAACCGAAGAGCGTATGGACGAGAAGATGCTCATCTTCAAAATACGCGAACGCATCCCTGAATTGCCCGAGCAATACCGAGACGTGCTCACCTTTCGTTTCATCGACGGATTGGGCACCGGAGAGATTGCGGAGAGGGTCGGAGTATCGGAGAATGTCGTGTCGGTGCGCATTCACCGCGGCATCGCGAAACTGAAAACACTTTGCGACACATACCTATGA
PROTEIN sequence
Length: 179
MKSREEKAFIEAFEAHADALFRHAFFRVSDREKAYDLTQDTYLKAWDYIVQGGEVKHYKSFLYRILHNLIIDSYRKKSSRSLDELLENEATAATTEGLLSEGSVRETEERMDEKMLIFKIRERIPELPEQYRDVLTFRFIDGLGTGEIAERVGVSENVVSVRIHRGIAKLKTLCDTYL*