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2013_40cm_scaffold_3

Search features with annotation key words

Displaying items 61-90 of 329 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_3_60
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

96505..97473
DNA (969bp) protein (323aa)
Pirin family protein n=1 Tax=Leptospira interrogans serovar Bataviae str. UI 08561 RepID=M6NZK9_LEPIR
Pirin family protein {ECO:0000313|EMBL:EKR53800.1}; TaxID=1049938 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. UI 12758.;"
pirin-like protein
2013_40cm_scaffold_3_61
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97482..98387)
DNA (906bp) protein (302aa)
Metallophosphoesterase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GSK3_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:CCH56882.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
metallophosphoesterase
2013_40cm_scaffold_3_62
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98422..99072)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GSK2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56881.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
2013_40cm_scaffold_3_63
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(99011..100276)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003654071
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCH56880.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
glycerophosphodiester phosphodiesterase
2013_40cm_scaffold_3_64
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(100273..101013)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003789075
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD58804.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
2013_40cm_scaffold_3_65
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

101074..101535
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CN75_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR30445.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
hypothetical protein
2013_40cm_scaffold_3_66
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101548..102132
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDT9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99399.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
2013_40cm_scaffold_3_67
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

102139..102705
DNA (567bp) protein (189aa)
DNA alkylation repair enzyme n=1 Tax=uncultured archaeon GZfos12E1 RepID=Q5Y0L2_9ARCH
putative DNA alkylation repair enzyme family
Putative DNA alkylation repair enzyme family {ECO:0000313|EMBL:AIE83671.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source
2013_40cm_scaffold_3_68
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

102705..103592
DNA (888bp) protein (296aa)
Radical SAM domain protein n=1 Tax=Leptospira noguchii serovar Panama str. CZ214 RepID=T0FDK3_9LEPT
Radical SAM domain protein {ECO:0000313|EMBL:EQA71278.1}; TaxID=1001595 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii serovar Panama str. CZ
splB; DNA repair photolyase SplB
2013_40cm_scaffold_3_69
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(103601..104521)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031E5DE8
Uncharacterized protein {ECO:0000313|EMBL:EOZ95766.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
2013_40cm_scaffold_3_70
unknown

Not on your lists

104633..104803
DNA (171bp) protein (57aa)

This feature has no annotations

2013_40cm_scaffold_3_71

Not on your lists

104984..105304
DNA (321bp) protein (107aa)
4Fe-4S ferredoxin n=1 Tax=Marinimicrobia bacterium SCGC AAA298-D23 RepID=UPI0003A4843F
4Fe-4S ferredoxin iron-sulfur binding domain protein (FdxA) {ECO:0000313|EMBL:AIF19345.1}; TaxID=1456529 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/II
ferredoxin/ferredoxin--NADP reductase
2013_40cm_scaffold_3_72
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

105524..106165
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJM7_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43917.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
2013_40cm_scaffold_3_73
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

106428..107219
DNA (792bp) protein (264aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YSX2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06124.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
cell envelope biogenesis protein OmpA
2013_40cm_scaffold_3_74
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

107263..107640
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B78046
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ95628.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
2013_40cm_scaffold_3_75
unknown

Not on your lists

comp(107718..107819)
DNA (102bp) protein (34aa)

This feature has no annotations

2013_40cm_scaffold_3_76
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

108046..109833
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4ZIS5_9MYCO
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
2013_40cm_scaffold_3_77
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(109911..112112)
DNA (2202bp) protein (734aa)
UDP-forming alpha,alpha-trehalose-phosphate synthase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BY26_ANAMD
UDP-forming alpha,alpha-trehalose-phosphate synthase Tax=CG_Dehalo_02
UDP-forming alpha,alpha-trehalose-phosphate synthase
2013_40cm_scaffold_3_78
R_OP11_Curtissbacteria_42_15, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(112118..113311)
DNA (1194bp) protein (398aa)
alpha,alpha-trehalase; K01194 alpha,alpha-trehalase [EC:3.2.1.28] Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_42_15_curated
hau:Haur_2832 alpha,alpha-trehalase (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28] id=85783 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
cytoplasmic trehalase (Alpha,alpha-trehalose glucohydrolase)
2013_40cm_scaffold_3_79
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(113524..114393)
DNA (870bp) protein (290aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=4976729 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
2013_40cm_scaffold_3_80
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

114681..115451
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=4525344 bin=GWF2_Bacteroidetes_40_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_40_14_curated
hypothetical protein
2013_40cm_scaffold_3_81
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

115508..116077
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI49_9BACT
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
2013_40cm_scaffold_3_82
unknown

Not on your lists

116104..116283
DNA (180bp) protein (60aa)

This feature has no annotations

2013_40cm_scaffold_3_83
unknown

Not on your lists

116280..116390
DNA (111bp) protein (37aa)

This feature has no annotations

2013_40cm_scaffold_3_84
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(116488..117357)
DNA (870bp) protein (290aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=3654162 bin=GWF2_Bacteroidetes_33_38 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
2013_40cm_scaffold_3_85
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(117397..118599)
DNA (1203bp) protein (401aa)
UDP-glucose dehydrogenase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMM8_9BACT
nucleotide sugar dehydrogenase
Tax=BJP_IG2102_Flavobacteriales_34_12
2013_40cm_scaffold_3_86
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(118627..120039)
DNA (1413bp) protein (471aa)
23S rRNA m(5)u-1939 methyltransferase (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWA2_Bacteroidetes_31_9b_curated
23S rRNA (Uracil-5-)-methyltransferase RumA id=1856315 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
RNA methyltransferase
2013_40cm_scaffold_3_87
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

120156..121385
DNA (1230bp) protein (410aa)
acetylornithine aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
rocD; ornithine--oxo-acid aminotransferase (EC:2.6.1.13)
ornithine aminotransferase id=3367056 bin=GWF2_Bacteroidetes_38_335 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
2013_40cm_scaffold_3_88
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(121386..122270)
DNA (885bp) protein (295aa)
Nitrilotriacetate monooxygenase component B n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DCK1_9BACT
Flavin reductase {ECO:0000313|EMBL:KEO74677.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
2013_40cm_scaffold_3_89
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(122282..124738)
DNA (2457bp) protein (819aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4D6_SPHS2
phenylalanyl-tRNA synthetase subunit beta
Displaying items 61-90 of 329 in total

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