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2013_60cm_scaffold_273_16

Organism: 2013_60CM_Gemmatimonadetes_65_52

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(20280..24944)

Top 3 Functional Annotations

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Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 999.99
  • Bit_score: 2413
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 999.99
  • Bit_score: 2342
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 999.99
  • Bit_score: 2413
  • Evalue 0.0

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 4665
ATGCCTGAACTGATGAAAGAAATTTCCTTCGGTAAGCTCGATGATCGGGGGATGCAGATGCCGCATCTCCTCGACATCCAGACGCGCGCCTTCGAGGCGTTGCTCCAGCTGGATGCCACCTCGCACGACCGCGAGGACATCGGTCTGGAACGCGTCTTCAAGGACCTGTTCCCCATCGCGGACGTCCACGAGAACTTCTCGCTGGAATTCGTCCGCTACACGCTCGGCGGCCCCAAGTACACCGTCGAGGAGTGCATCGAGCGCGACATGACCTACTCGGCGCCGCTCAAGGCGACGCTGCAGCTCGTGATCAACGAGGAGGTCAACGGCGTCAAGCGGCCGCGCAACATCATCGAGAAGGAAGTCTATCTCGGTGAGCTGCCGCTGCTGACCCCGCTCGGCACCTTCGTGATCAATGGGGCAGAGCGCGTCATCGTCAGCCAGCTTCACCGGTCGCCCGGCGTCGTGTTCGAGGAGAGCACGCATCCGAACGGCCAGCGGCTCATCTCGTCCCGCATCATTCCGTTCCGCGGATCGTGGGTCGAGTTCACGGTGGACATCCACGACATCGTGTACGTCCACATCGACAAGAAGAAGAAATTCCCGGCCACCGCGCTGCTGCGCGCGTTCGGCTACGGATCGAACTCGGACATCCTGCGGCTCTTCTTCGCCGTCCGCAGCCTCGATCTCACCAAGGAGCGCGAGTCGCGCACCGACCTCCGCGAGGCGCTCGGCGCCATCATCGCGGAGGACATCGAGCTGCCCGGCGAAGCTACGGCCGAGGACGCGCCCAAGGCGCGCACCAAGAAGGCGAAGGCGGAGCGCGAGCGCGCGGAGAACGCGCTGCTCGTCAAGGAAGGCGACGAGCTGACGGAAGAGGTGTACAATCGCCTGCGCCGCCAGGGCATCAAGACGGTCAAGGTCTTTGCCTCGTACATGACCATCGACCTGCGCGACGAGCAGGATGCCATCGAGCGGCAGGAGCGCCCGACGCGCCGGATGCTTGCCATCGACGTCGTCAGCCCCGACGGCGAGGTCATTGCCGAAGCCGGCCAGACGCTCAGTGACGCGCTGATCAAGAAGATTCGGAAGGGTGAGATCAACAAGGTCAAGGTGTTCGTGACGAGCGGTCGTGCGGAGAGCACGATGGTCAAGAACACGCTCGCCAAGGATCCCACAGCCCGGTACTACAAGAAGGAAGGCGGGGAGCAGCGCGAGTACGCCGTCGATTCCAAGACCGGTGAAGAGCTGGCACTGAAGCAGATCTATGGCCTGCTCCGTCCCGGCGACGCGCCCGATACGCTCACGGCCAAGCAGGCCCTGGAGCGGCTGTTCTTCTCGCCCAAACGGTACGACCTCGGTCGCGTGGGCCGCTACAAGATCAACCAGCGGCTGAACCTCAATGCACCGCCCGATCTCACCGTCCTGACGAAGGAAGATTTCGTCGAGATCGTGCGGTATCTGGTCGAGTTGCACGAGGGCCGTGGCCATGTGGACGACATCGACCATCTCGGCAATCGTCGCATCCGGTCGGTGGGCGAGCTCATCGCCAACCAATTCTCGGTGGGACTCTCCCGCATGGCGCGCCTGGTGAAGGAGCGCATGTCCATCAACACGGACCCGGAAAAGATCTCGCTGGACGATCTCGTGAATGCGCGTACGGTGAGCGCGGTGATCCAGGCGTTCTTCGGATCGTCACAGCTCTCGCAGTTCATGGATCAGACGAACCCGCTCGCCGAGCTGACGCACAAGCGTCGCCTCTCCGCGCTGGGTCCGGGCGGTCTGACGCGTGAGCGCGCCGGCTTTGAGGTGCGCGACGTGCACTACTCGCAGTACGGGCGCATGTGCCCCATCGAGACGCCGGAAGGTCCGAACATCGGCCTCATCACGTCGCTCGCGTGCTATGCGCGCGTGAACGACCTCGGCTTCGTGGAGACGCCGTATCGCGTCGTGCGAAACGGCAAGGTCACGAGCGACCTCGAGTGGCTGGACGCGAACAAGGAAGAGGACAAGGTCATCGCGCAGGCGAATGCCGCTCTGAATTCCGACGGCTCGTTCCTGGACGAGCTGGTGCTCGCCCGTCAGAACGGCGACGTGCCGCTCACGCCGGCTGACCGGATCGAGTACATGGACGTCGCGCCCGAGCAGCTGGTCTCCATCGCCGCGGCGCTCATTCCGTTCCTCGAGCACGATGACGCCAACCGCGCGCTCATGGGCTCCAACATGCAGCGCCAGGCCGTGCCGCTCCTCAACCCGAAGACGCCGTTCGTTGGCACCGGGCTGGAAGAGAAGGTCGCGGTGGATTCGGGCGCGGTCGTGATCGCGAAGCGCAGCGGCGTGGTCAGCCGCGTCACGGCGGACGAGATCATCGTCGATGCCGGTCCCGAGGAGCTTCGGCGCGCGGCGGAAGACGGCCGCGTGCTCGCTCGTCTGACGCAGCACGATCGCTACAAGCTGCGGAAGTACTGGCGCACCAATCAGGACACGGCCATCAACCAGCGGCCGCTGGTGAAGCTCGGCCAGGCGGTGAAGGTGGGCGACGTGCTCGCCGACGGCGCCGCGACCGAGATGGGCCAGCTCGCGCTCGGCGCCAATGTCGTCGTCGCGTTCATGCCCTGGTATGGCCACAACTTCGAGGACGCCATCGTGTTGAGCGAGCGTCTGGTGAAGGACGACGTGTATTCGTCGATCCACATCCAGGAGCTCGAGCTGCACGTGCGCGACACGAAGCGCGGGCAGGAAGAGATCACGCGAGAGATTCCCAACGTCTCGGAAGAGGCGCTGCTGGATCTCGACGAGCGCGGCATCGTCCGCATCGGCGCGCACGTCAAGCCGGGCGACATCCTCGTCGGCAAGATCACGCCGAAGGGCGAGACGGAGCTGTCACCGGAAGAGAAGCTGCTCACCGCCATCTTCGGCGAGAAGGCGAAGGACGTGAAGGACTCGTCGCTGAAGGTGCCGCCGGGTATGGAAGGGGTGGTAATTGATGTGAAGATCTTCTCGCGCATCGAGGATCAGGTCGTCGAGAAGGATCGCGGCGAACGGATCGGCGAAGTGCGTCGGCTCGAGGGCGAGGAGAAGCTCCGCGTCAACGACGTCCGCGACGCAGAGCTCGGAGAGCTGCTCGAGGGCGAGACCGTGGCGCTGGCGCTCAAGAGCGGGACCGTCGAGGAAGCCATTCCGGCGGGCACGAAGCTCACCGCGGGCGTGCTGCGCGATCTTCGGATCTCGTCGCTCGACCTCAAGACCTTCCGCGTCGCCGACAAGAAGGTGAACGACAAGATTCGCGCGATCATCGACGCGGCGAACGACGAGAAGGCGAAGCTCGAGGAGAAGGCCGAGGAGCGGATCGACCGCATCCTTCAGCCGGATGAGCTGCCGCCCGGCGTCATTCAGCTCGTGAAGGTCTATCTCGCCGAGAAGCGCAAGATCTCGGTGGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCATCGTGGCGCGCATCGTTCCCGAGGAGGACATGCCGTTCCTGCCGGACGGACGTCCGGTGGACATCGTGCTGAACCCGCTCGGCGTGCCGTCGCGCATGAACGTCGGACAGATTCTCGAGACCCATCTCGGATGGGCCGCGAAGCTGCTCGGCTTCTACGCCAAGACGCCGGTGTTCCAGGGCGCGAACGAGAAGGAAATCGGACTGCTGCTCAAGATCGCGGGCCTCACGTGGGTGCGCGATGCGCTCGAACTGAAGACGCCGAAGCTGGAAGTCGGCGATGCGGATGTGAAGAGCATTCTCGCGAACGTGAAGCCGGAACGTGTCGAGGGCGGCAAGGTGACGCTGCTGAGCGACGCGTCCCTGAACGATCTCGGCGCGCGCGGAATGTCGCAGGCCACGCGCGACGTCTATCACCGCATCCGTGATTTCATCGCGGCGGCGGCGAAGGAGCTCGTCGAGCGCGAGTCGACGGCTACGGGACACGAGCTCACGTTCCACCAGAGCGACGACCCGGAGCTCACGGCCGCACGCAAGACGGAGTACAAGGCGGCGGTGAAGCAGCTCGAGAAGGCGGCCGCGATGGCGCCAGCCGACGTGCTGGCGGATCGTGAGCTTGGCGCGCTCGGCGCGATGCTCGGACGGAAGTCGGACGCCGACGTGGACGCAGCGGCGGTTGAGCTGCTCCGTCTCGCAGGCATCACGCCGTTCGGAAAGGTTCGCCTCCGCGACGGCCGGAGCGGAGAGACCTTCGCCGCACCGGTCACGGTGGGCGCAGTGTACATGCTGAAGCTCTCGCACCTGGTCGATGACAAGATCCACGCGCGGAGCATCGGACCGTACTCGCTGGTCACGCAGCAGCCGCTCGCCGGCAAGGCGCAGTTCGGCGGCCAGCGGTTCGGAGAAATGGAGGTGTGGGCGCTGGAAGCGTACGGCGCCGCGCACGTCCTGCAGGAGATCCTGACGGTCAAATCGGACGACGTGAACGGTCGCAGCCGCGTGTACGAGGCGATCGTGAAGGGGCAGAACCTGCCGGAGCCCGGCATCCCCGAGTCGTTCAACGTGCTGGTGAAGGAGCTTCAGGCCCTTGGTATCAAGGTGACCATGGGGCAGAGCACGGACGGTTTCTACGGCACCGGTATCGACACCGGCACGGCCGAGAATGCGTCCGGTAACGGGAGCGAGGAGTAG
PROTEIN sequence
Length: 1555
MPELMKEISFGKLDDRGMQMPHLLDIQTRAFEALLQLDATSHDREDIGLERVFKDLFPIADVHENFSLEFVRYTLGGPKYTVEECIERDMTYSAPLKATLQLVINEEVNGVKRPRNIIEKEVYLGELPLLTPLGTFVINGAERVIVSQLHRSPGVVFEESTHPNGQRLISSRIIPFRGSWVEFTVDIHDIVYVHIDKKKKFPATALLRAFGYGSNSDILRLFFAVRSLDLTKERESRTDLREALGAIIAEDIELPGEATAEDAPKARTKKAKAERERAENALLVKEGDELTEEVYNRLRRQGIKTVKVFASYMTIDLRDEQDAIERQERPTRRMLAIDVVSPDGEVIAEAGQTLSDALIKKIRKGEINKVKVFVTSGRAESTMVKNTLAKDPTARYYKKEGGEQREYAVDSKTGEELALKQIYGLLRPGDAPDTLTAKQALERLFFSPKRYDLGRVGRYKINQRLNLNAPPDLTVLTKEDFVEIVRYLVELHEGRGHVDDIDHLGNRRIRSVGELIANQFSVGLSRMARLVKERMSINTDPEKISLDDLVNARTVSAVIQAFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHYSQYGRMCPIETPEGPNIGLITSLACYARVNDLGFVETPYRVVRNGKVTSDLEWLDANKEEDKVIAQANAALNSDGSFLDELVLARQNGDVPLTPADRIEYMDVAPEQLVSIAAALIPFLEHDDANRALMGSNMQRQAVPLLNPKTPFVGTGLEEKVAVDSGAVVIAKRSGVVSRVTADEIIVDAGPEELRRAAEDGRVLARLTQHDRYKLRKYWRTNQDTAINQRPLVKLGQAVKVGDVLADGAATEMGQLALGANVVVAFMPWYGHNFEDAIVLSERLVKDDVYSSIHIQELELHVRDTKRGQEEITREIPNVSEEALLDLDERGIVRIGAHVKPGDILVGKITPKGETELSPEEKLLTAIFGEKAKDVKDSSLKVPPGMEGVVIDVKIFSRIEDQVVEKDRGERIGEVRRLEGEEKLRVNDVRDAELGELLEGETVALALKSGTVEEAIPAGTKLTAGVLRDLRISSLDLKTFRVADKKVNDKIRAIIDAANDEKAKLEEKAEERIDRILQPDELPPGVIQLVKVYLAEKRKISVGDKMAGRHGNKGIVARIVPEEDMPFLPDGRPVDIVLNPLGVPSRMNVGQILETHLGWAAKLLGFYAKTPVFQGANEKEIGLLLKIAGLTWVRDALELKTPKLEVGDADVKSILANVKPERVEGGKVTLLSDASLNDLGARGMSQATRDVYHRIRDFIAAAAKELVERESTATGHELTFHQSDDPELTAARKTEYKAAVKQLEKAAAMAPADVLADRELGALGAMLGRKSDADVDAAAVELLRLAGITPFGKVRLRDGRSGETFAAPVTVGAVYMLKLSHLVDDKIHARSIGPYSLVTQQPLAGKAQFGGQRFGEMEVWALEAYGAAHVLQEILTVKSDDVNGRSRVYEAIVKGQNLPEPGIPESFNVLVKELQALGIKVTMGQSTDGFYGTGIDTGTAENASGNGSEE*