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sw_7_scaffold_5645_1

Organism: SW_7_Halosimplex_carlsbadense_67_16

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 9 / 38
Location: 3..455

Top 3 Functional Annotations

Value Algorithm Source
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 150.0
  • Bit_score: 263
  • Evalue 3.40e-68
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 150.0
  • Bit_score: 263
  • Evalue 1.70e-67
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 150.0
  • Bit_score: 263
  • Evalue 1.20e-67

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 453
ACCGAGGGGTCGGACCTGGGCGCGGTACTGGACATCGAGGGCGTGGACACCACCCGGACCACGTGTAACAACATCCACGAGATCTACCGCAACCTGGGCGTCGAGGCCGCACGCGAGGCGGTCATCGACGAGACGATGAACACCCTCGAAGAGCAGGGGCTGGACGACGTGAACATCCGCCATCTAATGTTGGTGGCGGACATCATGACGAACCGCGGAACCATCGAATCGATCGGTCGCCACGGCATCTCGGGCAACAAGGAGTCCGTGCTCGCGCGGGCGGCGTTCGAGGTGACGGTCAACCACCTGCTCGACGCCGCCATCCACGGCGAGGTCGACGACCTGAACGGCGTCACGGAGAACGTCATCGTCGGCAAGCCAATCAAGCTCGGGACGGGCGACGTCGACCTCAGGATGGACGCCAGCCGGAGCGGCGGCGGACAGGCCGACTGA
PROTEIN sequence
Length: 151
TEGSDLGAVLDIEGVDTTRTTCNNIHEIYRNLGVEAAREAVIDETMNTLEEQGLDDVNIRHLMLVADIMTNRGTIESIGRHGISGNKESVLARAAFEVTVNHLLDAAIHGEVDDLNGVTENVIVGKPIKLGTGDVDLRMDASRSGGGQAD*