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DS1215_scaffold_205_1

Organism: DS1215_Pseudomonas_63_8_partial

partial RP 3 / 55 BSCG 3 / 51 ASCG 3 / 38
Location: comp(3..629)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4Y162_PSEMY similarity UNIREF
DB: UNIREF90
  • Identity: 91.9
  • Coverage: 209.0
  • Bit_score: 390
  • Evalue 4.90e-106
Probable tonB-dependent receptor yncD {ECO:0000313|EMBL:CDR93549.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 416
  • Evalue 1.70e-113
probable tonB-dependent receptor yncD similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 416
  • Evalue 3.40e-114

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCTGCCTCTGCCGTTTGCCCGCCAACCTGCCCACTTCACCCTGCTCGCCCTCGCCTGCCTGAGCGGCCACAGCGCCTTCGCCGAAGAGCCCATGCAGCTCGACTCGCTGCAGGTCAGCGGCGTGCAGATGAGTGCAGTGGAGGCCGCGAGCGAGGAGCTCAAGCGCGTCCCCGGCGCCACCAATGTGGTGGACATGGCCAAGGTCGAGCAAGGCCGCGTGGCCGGCGTCGCCGACGTGCTGGCCTACCAGCCCGGGGTCTATGCGCAGTCGCCCGGCAACGAGGGGGTGAAGATCAGCGTGCGCGGCTCGGGTATCAACCGTGGCCCCGGCTCGCACGCTTCCGGCACCCATATCCTGCTCGACGGCCTGCCTCTGACCGGCTCCGGCGGCACGCCCTACGAACTGCTGGAACCCCTGTGGATAAGTCGCGCCGAGGTGCTGCGTGGCGCCAATGGCTTCGACCGCGGCTCACTGGCTCTGGGCGGCGCCGTCGACTACATCACCCACACCGGCTACACCGCGCCCAAGCTGCAGCTGCGCTATGAAACCGGCAGCTACGGTTACCAGAAGCGCAACATTGCCTCCGGTCAGGTGCTGGGCGATTTCGACTACTACCTCGCCCTC
PROTEIN sequence
Length: 209
MLPLPFARQPAHFTLLALACLSGHSAFAEEPMQLDSLQVSGVQMSAVEAASEELKRVPGATNVVDMAKVEQGRVAGVADVLAYQPGVYAQSPGNEGVKISVRGSGINRGPGSHASGTHILLDGLPLTGSGGTPYELLEPLWISRAEVLRGANGFDRGSLALGGAVDYITHTGYTAPKLQLRYETGSYGYQKRNIASGQVLGDFDYYLAL