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S13_scaffold_276_curated

Search features with annotation key words

Displaying items 31-50 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_276_curated_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26916..28277)
DNA (1362bp) protein (454aa)
Type I secretion outer membrane protein TolC id=1262436 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Type I secretion outer membrane protein TolC rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28322..28669)
DNA (348bp) protein (116aa)
Rhodanese-related sulfurtransferase id=1262437 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rhodanese-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_276_curated_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28708..29403)
DNA (696bp) protein (232aa)
Protein L-isoaspartyl methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=5079878 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
protein-L-isoaspartate carboxylmethyltransferase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_31
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29446..32640)
DNA (3195bp) protein (1065aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=5079879 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acriflavin resistance protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_32
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32651..33847)
DNA (1197bp) protein (399aa)
secretion protein HlyD id=5079880 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
RND family efflux transporter MFP subunit rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_33
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33844..34578)
DNA (735bp) protein (245aa)
TetR family transcriptional regulator id=5079881 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TetR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_34
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34642..36126)
DNA (1485bp) protein (495aa)
potassium/proton antiporter; K11105 cell volume regulation protein A id=5079882 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_35
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36239..36655
DNA (417bp) protein (139aa)
hypothetical protein id=5079883 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_36
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36660..37193)
DNA (534bp) protein (178aa)
Activator of Hsp90 ATPase 1 family protein id=1262444 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
activator of Hsp90 ATPase 1 family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_276_curated_37
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37190..37597)
DNA (408bp) protein (136aa)
Transcriptional regulator, ArsR family id=1262445 bin=GWE1_Burkholderiales_65_30 species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ArsR family transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_38
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37651..38100
DNA (450bp) protein (150aa)
hypothetical protein id=5079886 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_39
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38097..38606
DNA (510bp) protein (170aa)
GNAT family acetyltransferase id=5079887 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
GNAT family acetyltransferase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_40
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38654..38929
DNA (276bp) protein (92aa)
Antitoxin for YoeB toxin {ECO:0000313|EMBL:EWS65213.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
prevent-host-death family protein id=5079888 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
S13_scaffold_276_curated_41
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

39662..39931
DNA (270bp) protein (90aa)
Cyclase/dehydrase id=4749503 bin=GWC2_Deltaproteobacteria_55_46 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
cyclase
Tax=GWC2_Nitrospirae_57_9_curated
S13_scaffold_276_curated_42
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40023..40463
DNA (441bp) protein (147aa)
Cupin domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2TJ59_9BURK
Cupin domain-containing protein {ECO:0000313|EMBL:EJL78537.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Cupin 2 barrel domain-containing protein
S13_scaffold_276_curated_43
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40562..41749)
DNA (1188bp) protein (396aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.99.7) rbh
Glutaryl-CoA dehydrogenase id=1262450 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_276_curated_44
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42022..42906
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family id=1262451 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_45
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42929..43801)
DNA (873bp) protein (291aa)
Helix-turn-helix transcriptional regulator, AraC family id=1262452 bin=GWE1_Burkholderiales_65_30 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
AraC family transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_46
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44065..44538
DNA (474bp) protein (158aa)
iorA; isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16); K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] id=5079893 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
iorA; Isoquinoline 1-oxidoreductase alpha subunit (EC:1.3.99.16)
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_276_curated_47
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44552..45904
DNA (1353bp) protein (451aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16] id=5079894 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 31-50 of 50 in total

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