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S15_scaffold_518_curated_16

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(18555..21593)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 1012.0
  • Bit_score: 1807
  • Evalue 0.0
Ribonuclease E n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDT5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 1012.0
  • Bit_score: 1807
  • Evalue 0.0
  • rbh
ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 1059.0
  • Bit_score: 1297
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3039
ATGCGCTGGCCGCCGAACGCACCGTTCGCCGTCAAGAGCTCAAAAATGCCGAACAAAATGTTGATCGATGCCACCCATCCGGAAGAGACCCGGGTGGTCGTGGTCCGCGGCAATCGCGTCGAGGAATTTGATTTCGAGTCTGCCCAGCGCAAGCAACTGCGCGGCAACATCTATCTCGCCAAGGTCACCCGCGTCGAGCCATCGCTGCAAGCCGCCTTCATCGAATACGGCGGCAATCGCCATGGCTTTCTGGCCTTCAGCGAAATCCACCCCGATTACTATCAGATCCCGGTTGCCGATCGTCAGGCGCTGATCGAGGCCGACGAACGCGCGCACCGTGAAGCCGAAGAAGAATCGGAAAACCGCTCCAATCGCAGGCGCTCCCGCCATCGCAGTTCCCGGCGCCGCGACCGTGGCGAGCGTGTGCAGAGCGCGATTGTCGAAGGCGCGAGCCCGGAGGCGGAAGCCGCGCAACCAACCGATGCCGCGCAGGTCGGCGATCACGCACCGGATCACGGCCATGATGATGCGCACGACCATGACCACCAGCATGATAATGCGCATCAAGACGAACATGGCCACCAGCATGGTGAGGCTCATGACGTTGCGGCCCTCCCGGCTGGAAGCGATTACCAAGAAGAGCACCATGCCGACGATGCCACGTCGGCCGTAGCATCTCAGGAACTGTCTGCACCGGTCGCCGCACGGGGCGAGTACGCCCATGACGATCATTCCCATGACCAAGCGCTCGATGATCATGAGCATGACGATCATCAGCCCGAACCGCACGCCCATGATGAGGCTCACGAAGCGCCCGTCGTTCCTCTCGGTGACGACCATCAAGACGAGCACCACGCCGACGATGCCGATGGTGACGACGATGAAGACGGTGAAGACGCCGAGGAAGAAGTCGTCGAGTCGGTCGGTGGCGACGACGTGCTGGAAGAAGTGCCGGAACGCGCCTTCCGCCCTCGCCGCCAGTACAAGATTCAGGAAGTCATCAAGCGCCGCCAGGTGATGCTGGTTCAGGTCGTCAAGGAAGAGCGCGGCAACAAGGGCGCGGCGCTGACGACTTACCTGTCGCTCGCCGGCCGTTATGCCGTGCTGATGCCCAACACGGCACGCGGCGGCGGCATCAGCCGCAAGATCACCTCAGCACAGGATCGTTCGCGCCTGAAAGACGTGGTGCAGGATCTCGATGTGCCGGAAGGCATGGGGATCATCCTGCGCACCGCCGGCGCGTCCCGCACCAAGCCCGAGATCAAGCGCGACTTCGAATACCTGATCCGGATGTGGGAAACCGTCCGCGACACCACGCTGAGATCGCAGGCTCCGACCCTCGTTTACGAGGAAGGCTCGCTGATCAAGCGCTCGCTGCGCGACCTCTACAACAAGGAAATCGACGAAGTCCTCGTTGCCGGTGAATCCGGTTTCAACGAAGCCCGTGATTTCATGAAGATGCTGATGCCAAGCAATGTTCGCGCGGTGAAGCAGTATCGCGACGGCCAGCCTCTGTTTTCGCGCATGGGCGTAGAGAGTCAGCTCGACGCGATGTTCTCTCCCACGGTGACGCTCAGATCTGGCGGCTACATCGTGATCAACCAGACCGAAGCGCTGGTCTCGATCGACGTCAATTCCGGGCGCTCCACCCGCGAACATCACATCGAGGATACCGCGCTCAAGACCAATCTCGAAGCCGCCGAGGAAGTCGCACGCCAGTTACGCCTGCGCGATCTCGCGGGTCTCATCGTGATCGATTTCATCGACATGGACGAGAAGCGCAACAACCGTGCGGTCGAGCGCAAACTCAGCGACTGCCTGCGGCAGGACCGTGCCCGCATCCAGGTGGGACGCATCTCGCACTTCGGCCTGCTCGAGATGTCGCGCCAGCGCATCCGCGCCAGCGTGCTGGAAAGCTCCACCGAGCCTTGTCCGCATTGCGGCGGCACCGGTCACGTCCGCTCGGTCTCGTCCGTCGCGCTGCAACTGCTGCGCGGCCTCGAAGAGACCCTGATGAAGGGnnnnnnnnACAATCTGACGGTGCGCACGCGGACCGACGTCGCGCTCTATGTGCTCAACCACAAGCGCGGCCACCTGCGTGATCTCGAAAACGGATTCAAGGTCACGCTGGCGGTTATCGCCGATGCGACGATCAGCGGTCAGCAGTCCTACGTGATCGACCGCGGCGAAGCCGTTCATACGCTCGAAGCCGCCAAGGCCATCCTTGCGGCACAGCTCGCCGCATCCCCGGCTCCGGTCGAGGACACCTACGACTACGAAGATGACGAGACTTTCGAAGCCGAGGTCGAGTTCGAAGGCGACGATGAGGACAATGCCGAGACTCAATCAGCCGACGCGGCTCCTGTCGCGGAGGGCGAAGAAGGTCCGCGCCGCAAGCGCCGCCGCCGCAGGCGTGGCCGTGGCGGAGAAGCGCGTGACGGAGTACAGGCTGCCGATAGAGGCGATACGCCCGGCATCGCGCCACAGGATGACGCCATCGGCGAAGCCAGTGACGGCGATGAAGGCGACGACGAGCAGGACGAGCAGAACGGCGAGCCACGCACCGAGCAGAACGCGAATGGCGAACGCCGTCCGCGCCGCCGCGGCCGCCGTGGCGGCCGCCGCCGCCGTGGTGGCAACGAAGCCAACACAGCTGAGGGTGCCGAACCTGGCGAGGGAATTGTCTCTACTATCGCCGACGATCTCGGGCCGCTGCCGGAATCTGAAGCCACCGAGGCTGCCGCCGATTTGTCTGCACCGGCAGAGCCGGCGCGCGAGGAGCGTCCCGCTTACGTCCCACAGCCTGAGCCGGTGACGCCTCCCGTTATTTCGACGCCGGAAGATACCGAAGCAGCTCCGCGCAAGCGGTCGACTGTTCGCGAGAAGGTCAGCTTCTTTTTCGGCGAGACGCCTAAACAGGAACAGGAACCCGCTCCTGTTCAAACACAAACACCGGCGCCGTCAACGGAGCCGACGCAGCCGCAGACCGAGACCCCTCAACCGCGACGCGCGGGCTGGTGGTCGCGGCGCGGCGAGTAA
PROTEIN sequence
Length: 1013
MRWPPNAPFAVKSSKMPNKMLIDATHPEETRVVVVRGNRVEEFDFESAQRKQLRGNIYLAKVTRVEPSLQAAFIEYGGNRHGFLAFSEIHPDYYQIPVADRQALIEADERAHREAEEESENRSNRRRSRHRSSRRRDRGERVQSAIVEGASPEAEAAQPTDAAQVGDHAPDHGHDDAHDHDHQHDNAHQDEHGHQHGEAHDVAALPAGSDYQEEHHADDATSAVASQELSAPVAARGEYAHDDHSHDQALDDHEHDDHQPEPHAHDEAHEAPVVPLGDDHQDEHHADDADGDDDEDGEDAEEEVVESVGGDDVLEEVPERAFRPRRQYKIQEVIKRRQVMLVQVVKEERGNKGAALTTYLSLAGRYAVLMPNTARGGGISRKITSAQDRSRLKDVVQDLDVPEGMGIILRTAGASRTKPEIKRDFEYLIRMWETVRDTTLRSQAPTLVYEEGSLIKRSLRDLYNKEIDEVLVAGESGFNEARDFMKMLMPSNVRAVKQYRDGQPLFSRMGVESQLDAMFSPTVTLRSGGYIVINQTEALVSIDVNSGRSTREHHIEDTALKTNLEAAEEVARQLRLRDLAGLIVIDFIDMDEKRNNRAVERKLSDCLRQDRARIQVGRISHFGLLEMSRQRIRASVLESSTEPCPHCGGTGHVRSVSSVALQLLRGLEETLMKXXXXNLTVRTRTDVALYVLNHKRGHLRDLENGFKVTLAVIADATISGQQSYVIDRGEAVHTLEAAKAILAAQLAASPAPVEDTYDYEDDETFEAEVEFEGDDEDNAETQSADAAPVAEGEEGPRRKRRRRRRGRGGEARDGVQAADRGDTPGIAPQDDAIGEASDGDEGDDEQDEQNGEPRTEQNANGERRPRRRGRRGGRRRRGGNEANTAEGAEPGEGIVSTIADDLGPLPESEATEAAADLSAPAEPAREERPAYVPQPEPVTPPVISTPEDTEAAPRKRSTVREKVSFFFGETPKQEQEPAPVQTQTPAPSTEPTQPQTETPQPRRAGWWSRRGE*