ggKbase | organisms

Consensus taxonomy: Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: FUEL_CELL_S15_Burkholderiales_59_53 Manually curated genome
Original version: FUEL_CELL_S15_Burkholderiales_59_53

Properties

Avg. coverage: 1.00 Longest contig: 211.18 Kbp Bin length: 1.83 Mbp GC content: 58.54 %

Contigs count: 491 Features count: 2191 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 38 / 55 MC: 1 BSCG 36 / 51 MC: 2 ASCG 7 / 38

Displaying items 301-350 of 491 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
S15_scaffold_6502_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1536 bp	51.24	1.00	96.88
S15_scaffold_5874_curated Species: RLO_Burkholderiales_64_33 (50%)	2	1555 bp	58.14	1.00	74.28
S15_scaffold_4925_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1837 bp	59.28	1.00	96.35
S15_scaffold_14656_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1103 bp	61.11	1.00	88.94
S15_scaffold_12376_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1029 bp	59.57	1.00	100.29
S15_scaffold_10992_curated Species: Aquabacterium sp. NJ1 (50%)	2	1102 bp	59.71	1.00	89.84
S15_scaffold_11613_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1078 bp	59.37	1.00	94.34
S15_scaffold_5771_curated Species: Acidovorax sp. NO-1 (100%)	2	1651 bp	61.30	1.00	93.40
S15_scaffold_25049_curated Species: R_Burkholderiales_64_960 (50%)	2	1097 bp	61.53	1.00	91.34
S15_scaffold_10017_curated Species: R_Burkholderiales_64_960 (100%)	2	1181 bp	60.63	1.00	65.79
S15_scaffold_12794_curated Species: GWA2_Burkholderiales_64_37_curated (100%)	2	1016 bp	59.65	1.00	98.33
S15_scaffold_5179_curated Species: R_Burkholderiales_64_960 (100%)	2	2252 bp	61.15	1.00	90.59
S15_scaffold_10014_curated Species: Acidovorax citrulli (50%)	2	1165 bp	60.43	1.00	55.11
S15_scaffold_9041_curated Species: R_Burkholderiales_64_960 (100%)	2	1261 bp	59.79	1.00	84.46
S15_scaffold_9885_curated Species: Acidovorax avenae (50%)	2	1157 bp	56.44	1.00	72.34
S15_scaffold_12523_curated Species: Acidovorax sp. KKS102 (50%)	2	1012 bp	59.09	1.00	70.55
S15_scaffold_10457_curated Species: RLO_Burkholderiales_64_33 (50%)	2	1155 bp	60.61	1.00	96.62
S15_scaffold_22649_curated Species: R_Burkholderiales_64_960 (50%)	2	1345 bp	58.66	1.00	97.70
S15_scaffold_10455_curated Species: Acidovorax sp. KKS102 (50%)	2	1130 bp	61.15	1.00	84.16
S15_scaffold_8474_curated Species: Acidovorax sp. KKS102 (50%)	2	1911 bp	61.54	1.00	83.52
S15_scaffold_7255_curated Species: R_Burkholderiales_64_960 (100%)	2	1433 bp	59.46	1.00	99.65
S15_scaffold_7319_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1394 bp	61.41	1.00	80.06
S15_scaffold_12466_curated Species: R_Burkholderiales_64_960 (100%)	2	1063 bp	61.71	1.00	93.98
S15_scaffold_8170_curated Species: R_Burkholderiales_64_960 (100%)	2	1341 bp	49.22	1.00	96.87
S15_scaffold_16356_curated Species: RLO_Burkholderiales_64_33 (100%)	2	1276 bp	60.97	1.00	76.65
S15_scaffold_8582_curated Species: Acidovorax sp. NO-1 (100%)	2	1296 bp	59.88	1.00	84.26
S15_scaffold_22426_curated Species: GWA2_Burkholderiales_64_37_curated (100%)	2	1127 bp	61.40	1.00	79.33
S15_scaffold_4826_curated Species: RLO_Burkholderiales_64_33 (50%)	2	2173 bp	56.37	1.00	82.83
S15_scaffold_12947_curated Species: Acidovorax temperans (50%)	2	1004 bp	59.46	1.00	84.56
S15_scaffold_6256_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1562 bp	60.18	1.00	91.61
S15_scaffold_12531_curated Species: R_Burkholderiales_64_960 (50%)	2	1037 bp	61.52	1.00	80.14
S15_scaffold_17017_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1331 bp	62.06	1.00	73.48
S15_scaffold_5952_curated Species: Comamonas testosteroni (50%)	2	1552 bp	58.38	1.00	85.82
S15_scaffold_6706_curated Species: R_Burkholderiales_64_960 (50%)	2	2148 bp	60.89	1.00	74.30
S15_scaffold_13254_curated Species: RLO_Burkholderiales_64_33 (100%)	2	1260 bp	59.52	1.00	89.05
S15_scaffold_11837_curated Species: Rubrivivax benzoatilyticus (50%)	2	1004 bp	60.56	1.00	97.11
S15_scaffold_12385_curated Species: GWA2_Burkholderiales_64_37_curated (100%)	2	1024 bp	59.77	1.00	98.73
S15_scaffold_23168_curated Species: RLO_Burkholderiales_64_33 (50%)	2	1494 bp	60.51	1.00	79.12
S15_scaffold_10884_curated Species: Acidovorax sp. CF316 (50%)	2	1128 bp	60.99	1.00	88.83
S15_scaffold_12326_curated Species: Acidovorax delafieldii (50%)	2	1050 bp	60.00	1.00	94.57
S15_scaffold_11747_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1027 bp	56.96	1.00	88.22
S15_scaffold_15983_curated Species: Acidovorax temperans (50%)	2	1524 bp	59.19	1.00	73.03
S15_scaffold_9532_curated Species: RLO_Burkholderiales_64_33 (100%)	2	1220 bp	59.10	1.00	71.07
S15_scaffold_10711_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1082 bp	61.65	1.00	83.73
S15_scaffold_8658_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1278 bp	59.55	1.00	83.80
S15_scaffold_33375_curated Species: GWA2_Burkholderiales_64_37_curated (100%)	2	1157 bp	61.71	1.00	84.01
S15_scaffold_9450_curated Species: RLO_Burkholderiales_64_33 (100%)	2	1192 bp	49.58	1.00	98.66
S15_scaffold_47563_curated Species: RLO_Burkholderiales_65_40 (50%)	2	1483 bp	59.41	1.00	90.83
S15_scaffold_10742_curated Species: GWA2_Burkholderiales_64_37_curated (50%)	2	1137 bp	61.30	1.00	80.47
S15_scaffold_10492_curated Species: GWA2_Burkholderiales_64_37_curated (100%)	2	1514 bp	59.38	1.00	80.45

Displaying items 301-350 of 491 in total

S15_RifCSP_Burkholderiales_59_53_curated

FUEL_CELL_S15_Burkholderiales_59_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

S15_RifCSP_Burkholderiales_59_53_curated

FUEL_CELL_S15_Burkholderiales_59_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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