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S24_scaffold_2794_curated_4

Organism: S24_Micrococcoles_71_12_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2888..3820)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6L4_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 290.0
  • Bit_score: 393
  • Evalue 1.60e-106
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 273.0
  • Bit_score: 397
  • Evalue 9.10e-108
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 290.0
  • Bit_score: 393
  • Evalue 4.50e-107
  • rbh

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Taxonomy

Cellulomonas carbonis → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGAGCGCACAGACGGAACGCATTCCGGCAGGGAGCGTCGCTGCCCGATTCCCGTCTGCGTCGGGCCTCCTGCCGCATCAGCACGGTGGTCCGGCGACGACACCCGGTGCCCGGCACCTCGGTGTCGTGGTCGTCGACGACACCGAGGTCGACGAGGTCGACGAGGCCGTCGACACGATCGGGGAGATCTGGGCCGAGTTCAAGGCGACCGGGGACCGGATGCTGCGTGAACAGCTCATCCTGCGATACGCACCGCTCGTCACGGCCGTGGCCGGGCGGGTCGGGATGCGGCTGCCGAGCACGGTCGAGCAGGCGGACCTCGTCTCCTACGGGATGTTCGGGCTGATCGACGCGATCGAGAAGTACGAGCTGGGCCGCGCCGTGAAGTTCGAGACCTACGCGAGCGCCCGCGTGCGCGGGGCCATCATCGACGAGCTCCGGGCGATCGACTGGATCCCGCGCTCCGTCCGCACCAAGGCCCGCGCCGTCGACCGCGCCTACGCGGAGCTCGAGGGCGAGCTTCGGCGTACCCCCAGCGAGGCCGAGGTCGCCGCCAGGCTGGAGATGGGGGTCGGTGAGCTGAGGGCCGTCTTCAGCCAGCTCTCCACCGTCAACGTCGCGGCCCTCGACGACGTGCTCGGGGCCGGCGAGGACCGCGCTGACAACATCGCGCTGATCGACACGCTCGGCGACTCGCGGGCTCAGGACCCGGCAGGTTCGTTCGAGGTGCAGGAGACCAAGTTCCTGCTCGCCCGTGCGGTCGAGCAGCTCGGCGAGCGCGAGAAGATCGTGCTCGTCCTGTACTACTACGAGGGCATGACGCTGGCAGAGATCGGCCGGGTACTCGGGGTGACCGAGTCGCGGATCTCGCAGATGCACACGGCGGCGATGCTGCGACTGCGGGCGACGCTGCAGAGCTCCGAGCGCGGCTGA
PROTEIN sequence
Length: 311
MSAQTERIPAGSVAARFPSASGLLPHQHGGPATTPGARHLGVVVVDDTEVDEVDEAVDTIGEIWAEFKATGDRMLREQLILRYAPLVTAVAGRVGMRLPSTVEQADLVSYGMFGLIDAIEKYELGRAVKFETYASARVRGAIIDELRAIDWIPRSVRTKARAVDRAYAELEGELRRTPSEAEVAARLEMGVGELRAVFSQLSTVNVAALDDVLGAGEDRADNIALIDTLGDSRAQDPAGSFEVQETKFLLARAVEQLGEREKIVLVLYYYEGMTLAEIGRVLGVTESRISQMHTAAMLRLRATLQSSERG*