ggKbase home page

13_1_40cm_4_scaffold_129_12

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(11186..12169)

Top 3 Functional Annotations

Value Algorithm Source
pdhB; pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 327.0
  • Bit_score: 518
  • Evalue 6.40e-144
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D1_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 327.0
  • Bit_score: 491
  • Evalue 6.00e-136
Transketolase central region similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 327.0
  • Bit_score: 497
  • Evalue 2.30e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 984
ATGCCGACCCTGACCTATCGCGACGCGCTGAACCAGGCGCTGCGGGAGGAGATGCAGCGCGACGCCAACGTCTTCCTCATGGGGGAGGAAGTCGGAGTGTACCAGGGCGCCTACAAGGTGAGCCGCGGGCTGCTTGAGGAGTTCGGGCCGATGCGTGTGGTGGACACGCCCATCGCCGAGCTCGGGTTCGCCGGCATCGGCGTGGGGGCGGCGATGGTGGGGCTCCGTCCGGTGATCGAGTTCATGACGTGGAACTTCGCGGTCCTCGCCCTCGACCAGATCGTCAACTCGGCGGCGAAGCTGCTGTACGAGTCGGGCGGCCAGTTACCCATCCCGATCGTGTTCCGGGGGCCGAACGGCGCGGCCCTCCAGCTCGGCGCGCAGCACTCACAGGCCTGGGAAAGCTGGCTGAGTCACATCCCCGGCCTCAAGGTGGTGGCGCCGGCGACGCCCGCGGACGCCAAGGGCCTGCTCAAGTCCGCGATCCGCGACAACAACCCCGTCATCGTGCTCGAGGGCGAGATGCTGTACAACACCAAGGGGGAGGTGCCCGAGGGCGAGTACGTCGTGCCGATCGGCAGGGCGGACGTGAAGCGGGCGGGGCGGGACGTCACGCTCATCTGCCACTCGAAGACCGTCACGGTCGCCCTCAAAGCCGCCGAGCAGCTCGCCGAGCAGGAGGGGGTGTCGGCGGAGGTGGTCGACCTGCGCTCGCTGCGGCCGCTCGACGAGGCCGCCATCACCGCGTCAGTCGCGAAGACGAACCGCGCCGTCGTGGTCGAGGAAGGGTGGCCGCACTGCGGCATCGGCGCGCAGGTCGTGGACGTGATCCAACGCGAGGCCTTCGACCACCTCGATGCCCCGGTGCTGCGGGTGACGCAGGCCGACGTACCGATGCCCTACAACAGGCAGCTCGAGCGGCTCGCCAAGCCAAGCCCCGACAAGGTCGTCGCCGCCGCGCGGCGCGTGCTCTACCTCGACTGA
PROTEIN sequence
Length: 328
MPTLTYRDALNQALREEMQRDANVFLMGEEVGVYQGAYKVSRGLLEEFGPMRVVDTPIAELGFAGIGVGAAMVGLRPVIEFMTWNFAVLALDQIVNSAAKLLYESGGQLPIPIVFRGPNGAALQLGAQHSQAWESWLSHIPGLKVVAPATPADAKGLLKSAIRDNNPVIVLEGEMLYNTKGEVPEGEYVVPIGRADVKRAGRDVTLICHSKTVTVALKAAEQLAEQEGVSAEVVDLRSLRPLDEAAITASVAKTNRAVVVEEGWPHCGIGAQVVDVIQREAFDHLDAPVLRVTQADVPMPYNRQLERLAKPSPDKVVAAARRVLYLD*