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13_1_20cm_4_scaffold_1046_12

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(12201..13499)

Top 3 Functional Annotations

Value Algorithm Source
LysM domain-containing protein id=7200269 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 similarity UNIREF
DB: UNIREF100
  • Identity: 28.2
  • Coverage: 390.0
  • Bit_score: 139
  • Evalue 9.90e-30
LysM-domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 26.6
  • Coverage: 444.0
  • Bit_score: 86
  • Evalue 1.60e-14
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 306.0
  • Bit_score: 238
  • Evalue 1.70e-59

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1299
ATGAGGAGGACGACGATCTGCCGTTCTGATCGAGCAGCCCTGCTCGCCCTTGTGGCAGGGCTGCTCGCGGGGGTGGTGGCGCCGCAACTCGTGGCCCAGGATACGACCCAAGCTCGGCCCGACACCGCGAAGGCGGTGCAGGATACGTCGCAGGCGCCCCCTCCCACCGGCCCCGCTCAGCAAGGACCGCTTCCCGCGACCCACACGGTCGCGACGGGCGAGACCTTGTGGTCGATCGCCCAGCTGTACTACAGCGATCCCCTGCTCTGGCCCGAGATCTACCGACTCAACACCACGCTGATCGAAGACCCACACTGGATTTATCCCGGCGAGGTGCTCAACCTCGGGTCGCCGGTCGCGGTGGCACAAGCGCCGCCCGAGACGACGACGGTCGCTCCGGCGCCCGGCGCCGACACCGTGCGTGCCGCGCCGACCGACACGGTGACTGCCATCGCGCCGCCGGACACGGCGGCGATGCCGGACACCGCCCAAGCCGTGGTGGAAGCGCCGCCTCCTGCTCCCACCGAGGCGTACCAGACGATCTTCGAGCGCCGCCGCACCACCGGCCAAGCGGTGCAGGACGTGCTGCGCGCGTACGCCAACCCTCTGTATCGCCCGCTGCGCCGTGGGGAGTTCTACGCGGCGGGTTTCCTGACGGAGAACGAGCGGCTGCCGTGGGGCCGAGTGCTGGGCAATACGTCGCCCCCGGCGATCCCGCGCCTTACGGAGCGCTCGACGGCGATTCGGTTCGATCAGATCGCGCTCGAGCCGCCACGGCGCGCGTCTTATCACGTGGGCGACTCGCTGCTGATCGCGCGCATCGACCGCGACATCGCCGGTTGGGGTGGTGTGGTGGTGCCGGTGGGGGTAGCGCGCGTGACGGAGGTGCAGCCCAGGCAGGTGTTGGCGGACGTGATCATGCAGTTCAGCCGAATCCACGACGGCCACCTGGCGATGCCGCTCGAGCCGTTCAAGGACCCGGGACTCGTACGGCCGACCCCGGTGGAGGGGGGCCTCGAGGGCCGGCTCGTGGCTGAGCGGGACATCCACGAGCTGGCTGGGCCGCAGCAGATCCTGTTCATCAACCGGGGCCGCGCCGAAGGGGTGACGCCCGGTGACGTGTTCGAGGTGTTCCGTCCCGCTTCCGGCGTCCCGGGTACGGCGTCCGAGGAAGTGCGTATGGTGCTCGAGATCGTGCACACCCGGGAGCACTCGGCGTCCGGGCTGGTGCTCAACATCAATCATCCAGACGTTCGCCCCGGGATGCCGGTCCGTCTCGTCCGGAAGATGCCCTCCTAA
PROTEIN sequence
Length: 433
MRRTTICRSDRAALLALVAGLLAGVVAPQLVAQDTTQARPDTAKAVQDTSQAPPPTGPAQQGPLPATHTVATGETLWSIAQLYYSDPLLWPEIYRLNTTLIEDPHWIYPGEVLNLGSPVAVAQAPPETTTVAPAPGADTVRAAPTDTVTAIAPPDTAAMPDTAQAVVEAPPPAPTEAYQTIFERRRTTGQAVQDVLRAYANPLYRPLRRGEFYAAGFLTENERLPWGRVLGNTSPPAIPRLTERSTAIRFDQIALEPPRRASYHVGDSLLIARIDRDIAGWGGVVVPVGVARVTEVQPRQVLADVIMQFSRIHDGHLAMPLEPFKDPGLVRPTPVEGGLEGRLVAERDIHELAGPQQILFINRGRAEGVTPGDVFEVFRPASGVPGTASEEVRMVLEIVHTREHSASGLVLNINHPDVRPGMPVRLVRKMPS*