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13_1_20cm_4_scaffold_35_35

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: 42273..42776

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 183.0
  • Bit_score: 136
  • Evalue 2.50e-29
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 154.0
  • Bit_score: 173
  • Evalue 2.00e-40
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 162.0
  • Bit_score: 143
  • Evalue 5.70e-32

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 504
GTGAGCCCAGAGGATCTGGCCGACGTCTACCGCACCACGTACCACGCGCTCGTGCGGTTTCTGTACCGCAAGGTGTGGGACGCCGAGCGCGCGGAGGACCTGGCTCAGGAGGCGTTTGCCCGAGCGCTGGTCCACAAGCCGGCCAACGCGCGTGGCTGGCTGTTCGTGGTGGCGGCGAACATGGCGCGCGACGATGCGCGCCGCGCGGCGCGCGAGCGGCGCCACCTCACGCTCCTGACGAGCGAGCCGGCAAGCGCCCCGCCGTCCGACGAGGCGGTACACACCGAGAGCGAGCGCGCCAGTGTGCGCGCCGCGCTCGAGCAGCTCACGCCGCGCGACCGCGAGGTGTTGCTCTTGTGGGACTCGGGGCTGTCGTACGACGAGATCGCGTCTCAGACGGGCCTGGCGCGCGGCGCCATCGGCACGACCCTCGCTCGGGCGCGCCGCCGGCTGGTGGAAGCGTTCGAGGCGGGAAAGGCGGGTGAACATGTCGCACGTGGATGA
PROTEIN sequence
Length: 168
VSPEDLADVYRTTYHALVRFLYRKVWDAERAEDLAQEAFARALVHKPANARGWLFVVAANMARDDARRAARERRHLTLLTSEPASAPPSDEAVHTESERASVRAALEQLTPRDREVLLLWDSGLSYDEIASQTGLARGAIGTTLARARRRLVEAFEAGKAGEHVARG*