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13_1_20cm_4_scaffold_55_18

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(17667..18524)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 278.0
  • Bit_score: 459
  • Evalue 2.20e-126
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 285.0
  • Bit_score: 510
  • Evalue 2.00e-141
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 280.0
  • Bit_score: 462
  • Evalue 7.30e-128

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGCAATTGAACACGGCGAAACGAGCCTCGTTCGACGAGGGATCGCTCGACCAATACCTCCGCGAGATCAGCCAATACCCGCTGATCACCCGGGAGGAGGAGGTGGCGCTCGCCCAGCGGATCAAGCAGCAGGATCCGGAGGCGCTCGACAAGCTGGTACGATCCAACCTGCGGTTCGTGGTATCGGTGGCCAAGAAGTACCAGAACCAGGGGGTGTCGCTCTCCGACTTGATCAACGAGGGCAACCTGGGCCTGATCCGTGCCGCGCACAAGTTCGACGAGACCAAGGGCATCAAGTTCATCTCGTACGCGGTCTGGTGGATCCGCCAGGCGATCCTCCAGGCGCTCGCCGAGCAGTCTCGCATCGTGCGCGTGCCGTTGAACCGCGCGGGAACGCTGCACCGCATCGGGAAGCGCTCCTCGGCGCTGCTGCAGGAGCTCGGGCGCGAGCCCACGGTGGAAGAGATCGCCGAGGGGATGGACATCTCCGAGGAGGAGGTGGCGAAGACCCTCTCCATCTCCCAGGCGCATCTGTCGCTCGACGCGCCGCTCACCCCGGGCGAAGACAACAAGCTGCTCGACTACCTCCCGGACACGACGAACCCTGGTCCCGACGACGAGATCTTCGAGCACGCCCTCACCGAGTCGATCGAGGAAGTGCTGGCGACCTTGAAGGAGCGGGAAGCGAAGATCCTGCGTCTCTATTTCGGTCTCGAGGGTCAGGAGCCGATGACCCTGGAGGAGATCGGGTCGCTGCTCGGCATCACGCGGGAACGGGTGCGACAGATCAAAGAGAAAGCGCTGGCGCGCCTGCGCCACGTCTCCCGCGCCCGCGCGCTGGAAAGCTTCCTGTTCTAG
PROTEIN sequence
Length: 286
MQLNTAKRASFDEGSLDQYLREISQYPLITREEEVALAQRIKQQDPEALDKLVRSNLRFVVSVAKKYQNQGVSLSDLINEGNLGLIRAAHKFDETKGIKFISYAVWWIRQAILQALAEQSRIVRVPLNRAGTLHRIGKRSSALLQELGREPTVEEIAEGMDISEEEVAKTLSISQAHLSLDAPLTPGEDNKLLDYLPDTTNPGPDDEIFEHALTESIEEVLATLKEREAKILRLYFGLEGQEPMTLEEIGSLLGITRERVRQIKEKALARLRHVSRARALESFLF*