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13_1_20cm_4_scaffold_152_29

Organism: 13_1_20CM_4_Gemmatimonadetes_66_11

near complete RP 42 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 28932..29351

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 135.0
  • Bit_score: 131
  • Evalue 5.10e-28
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 136.0
  • Bit_score: 148
  • Evalue 5.70e-33
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 136.0
  • Bit_score: 139
  • Evalue 6.90e-31

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 420
ATGGACAAGCGCATTCGCAACCGCCTCATCACCATCGGCGTGCTGATCGCAGCCAGCGTCGCTTCGCTCGTGCCCCGGAACACGCGGCAGCGCGTCGTCGATCAGACGACCGGCCGGATGAAGGACACGACGATCCGGCGCCTGCCGATCAATCTTGGCCTCGATCTCCAGGGCGGCATTCACCTCGCGCTCGAGGTGGACCAGTCCAAGGGTCCGATCCCGGATTGCGCCGACGCGATCCAGCGCGCCGAACGCGTCGTCCGCACGCGCATCGACGAGTTCGGCACCACCGAGCCCGTCGTGCAGATCCAGGGTCGCTGCCGGCTGATCGTCGAGCTTGCGGGCGAGAAGGATCCCGCGCGCGCCAGGAGCGTGATTCAGCGGACCGCCTTCCTCGAATTCCGCATCACCGACATGAAG
PROTEIN sequence
Length: 140
MDKRIRNRLITIGVLIAASVASLVPRNTRQRVVDQTTGRMKDTTIRRLPINLGLDLQGGIHLALEVDQSKGPIPDCADAIQRAERVVRTRIDEFGTTEPVVQIQGRCRLIVELAGEKDPARARSVIQRTAFLEFRITDMK