ggKbase home page

13_1_40cm_3_scaffold_1724_23

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 21508..22002

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SXT3_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 166.0
  • Bit_score: 81
  • Evalue 1.20e-12
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 151.0
  • Bit_score: 155
  • Evalue 5.40e-35
Ribosome maturation factor rimP similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 120.0
  • Bit_score: 81
  • Evalue 2.60e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 495
ATGCGGGCGAAGTTCGGCCCGCGCTTTTTTTTCATGCTCACTGAGAGTCTTGTCGAGGCCTTCCGAACCCGGTTGGACGCGTTGGGGTTCGACCTGGCCGACCTGCGCATCGGCGGTACACCGAACCGACCGCTCGTCCAAGTCCGCATTGACTGTCCGCCACGGAACGTCACGGTCGAAGATTGCAGTCGGGTCTCCCGGGCGCTCGAACAGTGGCTCGACGCGGACGGTGGCGGCCCCCTGGGCAATCGGTATGTCTTGGAAGTGTCGAGCCCGGGGATCGAGCGGCCCGTGCGCTGGCACCGGCATTGGGCCCGCTTTGTGGGACGCGATGTCAATGTGAAACTGGCGGGCATGGGCCGGGTGCGCGCGCGGATTGTCGCCGTGCCGACCGAAGAAACCGTCGTGCTGCAACCGCAGGGTGGCGCGGAGCGCGAATATCGACTTTCCGACGTCAAGGATGCCCGATTGGCGGGTGATACCGAGGACAAGTGA
PROTEIN sequence
Length: 165
MRAKFGPRFFFMLTESLVEAFRTRLDALGFDLADLRIGGTPNRPLVQVRIDCPPRNVTVEDCSRVSRALEQWLDADGGGPLGNRYVLEVSSPGIERPVRWHRHWARFVGRDVNVKLAGMGRVRARIVAVPTEETVVLQPQGGAEREYRLSDVKDARLAGDTEDK*