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13_1_40cm_3_scaffold_4148_16

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 12267..13334

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 354.0
  • Bit_score: 527
  • Evalue 8.10e-147
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 354.0
  • Bit_score: 527
  • Evalue 2.30e-147
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CAN96584.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 354.0
  • Bit_score: 527
  • Evalue 1.10e-146

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCGACCGCGAAGCATCGCGCGATCGATCACCTGCGACGCGGCAAGATGCAGGACCGCAAGCACGAGCATCTCGGCCGCCAGCTCGACGAGCGGCAAGTCAGTCCCGAAGCGGCGCTGGCCGCCGCCATCGACGACCACGTGGGCGACGATTTGCTGAGCCTCATTTTTACCGCGTGCCATCCCGTGCTCCCGACGGAAGCACGCGTCGCGCTGACCCTGCGACTGCTGGGTGGGCTGACGACCGACGAGATCGCCCGCGCGTTCCTCGTTTCGAAGGCCACGATTCAGCAGCGTATCGTGCGCGCCAAGCGTACTCTCGCCGCGGCGCGCGTGCCGTTCGAGGTACCGCGCGGCGCCGAGCTCACGGCGCGGCTGGGATCGGTTCTCGAGGTGATCTATCTCGTATTCAACGAGGGCTACTCGGCGACCGCCGGGGACGATTGGGTGCGGCCGGCGTTATGTGAGGACGCGCTGCGCCTGGGCCGTATTCTCGCCGAGCTCGCGCCTGACGCGGCCGAAGTGCATGGCCTGGTCGCGTTGCTGGAGATCCAGGCCTCACGCTTGCGCGCTCGCGTGAGTCCTTCGGGTGAGCCGATTCTGCTGCTCGACCAGGATCGCGGGCGGTGGGATCATCTGCTGATCGGCCGCGGTCTGGCGGCGCTCGAGTGCGCCGAAGCCCTGGGCGGCGCGTCCGGTCCCTACACGCTCCAGGCGGCGATCGCTGCCTGCCACGCGCGGGCCCGCACCGCCGCCGAGACCGATTGGACGCGCATCGTGGCACTCTACGACGCGCTGGCCCAGCTGATGCCTTCGCCGGTCGTTGAGTTAAATCGGGCGGTGGCGTTGGGCATGGCGTTTGGCCCCGCGGCCGGTCTGGAGGTCGTCGATTCGCTGACGACGGACCCGGCGTTGGCGGATTATCATCTGCTGCCGAGCGTGCGCGGGGATCTGCTCGCCAAGCTCGGCCGTTTCGAGGAGGCGCGTGCCGAGCTCGCCCGTGCGGCCGCATTGACGCAGAATGTGCGCGAACGCGATTTGCTTCTCAAAAAACTGGAGGCTTTGTGA
PROTEIN sequence
Length: 356
MATAKHRAIDHLRRGKMQDRKHEHLGRQLDERQVSPEAALAAAIDDHVGDDLLSLIFTACHPVLPTEARVALTLRLLGGLTTDEIARAFLVSKATIQQRIVRAKRTLAAARVPFEVPRGAELTARLGSVLEVIYLVFNEGYSATAGDDWVRPALCEDALRLGRILAELAPDAAEVHGLVALLEIQASRLRARVSPSGEPILLLDQDRGRWDHLLIGRGLAALECAEALGGASGPYTLQAAIAACHARARTAAETDWTRIVALYDALAQLMPSPVVELNRAVALGMAFGPAAGLEVVDSLTTDPALADYHLLPSVRGDLLAKLGRFEEARAELARAAALTQNVRERDLLLKKLEAL*