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13_1_40cm_3_scaffold_417_26

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(23735..24745)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 332.0
  • Bit_score: 348
  • Evalue 9.00e-93
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 325.0
  • Bit_score: 269
  • Evalue 6.40e-69
pseudouridine synthase, RluA family similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 328.0
  • Bit_score: 270
  • Evalue 8.20e-70

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1011
TTGAACATCACGTTCTGTGTCGTTCGCAGTGCTGAACGCCTCGATCGTTACCTCGCCGACCAGCTCGCTGTTTCTCGTACTCAAGCCGGACGCCTCATCGCCGACAAGCGCGTGACCGCGCGCGGCAAGCCGCTGCGCGCCTCGGCCGTGCTCGAGCGAGGCGTCGAAGTCACGGTGGAGCTTCCGGACGAGGCGGCGCCGCGCACCTACGCGCCGGCGCACGCCGAGCTGCGGTTCGTGTACGAGGACGAGGACCTCGCCGTGCTCGACAAGCCGGCCGGCCTGGTGGTCCATCCGGGGCCGGGTCACTGGGACGACTCGCTCGTGAATGTGCTGATCGGGCGCGGCACCGCGCTCTCGAGTGGCTCGACCGAGGGACGCCCCGGGATCGTGCACCGGCTCGATCGCGACACCTCAGGACTGCTGGTGGTGGCGAAGAGCGATCTCGTGCACCGCCGCCTCGCCGGGGCGATCGAACGACGTGAAGTCACGCGCGTGTATGCGGCGATCGTGTGGGGGCACCTGCGCAAGAGCCCGGTCGACATCGAAGCCCCGATCGCGCGGCATCCCAAGGAGCGCAAACGCATGACGGTCGCGCAGGGTGGCCGTCACGCGGTGACCCACGCGAGTGTCGTAGCCCGCTTCGCCCACACCGATCTGCTGCGCATCCGTCTCGGCACCGGCCGGACGCATCAGATTCGCGTGCATCTGGCGCACGTGGGTTGCCCGATCGTCGGTGACCGCGAGTACACGTTCGGCGGCAGCCGGCGCGTGACCCCGTCGGCGCGCATGGAAGCCGAACGGCTCGAGGCGCTCGCGCCGCGCCAGCTGCTCCACGCCGCGGCACTGTCGTTCGTCCATCCCGTGACCAACGTGCCGATCGCCCTCACGTCTGAATGGCCGGATGACTTGCGTCCCGCGCTTGCGGAGGCTGCAAGGGGGGCGGACGCGAATTTGCTTGCTCAGCGCAACCCCTTGCAGTATCTTGGCTTCTTCGCATCCGATGACTGA
PROTEIN sequence
Length: 337
LNITFCVVRSAERLDRYLADQLAVSRTQAGRLIADKRVTARGKPLRASAVLERGVEVTVELPDEAAPRTYAPAHAELRFVYEDEDLAVLDKPAGLVVHPGPGHWDDSLVNVLIGRGTALSSGSTEGRPGIVHRLDRDTSGLLVVAKSDLVHRRLAGAIERREVTRVYAAIVWGHLRKSPVDIEAPIARHPKERKRMTVAQGGRHAVTHASVVARFAHTDLLRIRLGTGRTHQIRVHLAHVGCPIVGDREYTFGGSRRVTPSARMEAERLEALAPRQLLHAAALSFVHPVTNVPIALTSEWPDDLRPALAEAARGADANLLAQRNPLQYLGFFASDD*